Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03728 ATGGAAACTCTGTGTTTACAAAGTGGCATTTCTGGGATAGCTTCTTCTTCTTCAATCCCTATAACTGCTGCAACTTCACGCGCCAATGAATACGCGCCTCAGTCTCAGGTAAGCGCGTTGGGGCGTTCCTTGTTTTCCAGATTCTCATTTAGATACCCTTTGAAGTCTCTCTGGCCTCGACCCACCGGTGGTTATAAAGGGCTTGCTATCGACGACGCCGTTTTGGAGGAGAAGCCAGAAGGAAACCAAGAAGACGGGCAAAATGGGAACTGGGTTTTCAAGATTTTTCATGTCAAGTCTATTATTTGGAGAGGGGAACAAAGGAACGATGCTAATGATGAAGAGGAAGAAGAAATTGTAACGAATGATGAAACTGATGAAGAGGAGGAGGAATGTGATGATTGTAGGGTTGATGATGAAGAAGAGGTTCAATTCGATAGAGACACGTTTTCTAGAATGCTCCGAAGGGTGTCTTTGACCGAAGCAAGATTATACGCACAAATGTCCCACTTGGGGAATCTAGCATACTCCATTCCCGAAATCAAGCCAGGGAACCTTTTGAAAAAATGTGGTTTGCGTTTTGTGACTTCATCGATAGAGAAGAAGGAATTGGCTTCATCTGGTGAAAAAAATCAGGCATCGGCTGAAATTCAGAAAGAAGAAAGTAATGAGAAGGATGGTGGAGAAAGAAAAGAGGAAAAGAATGGTGGATCCAAGACAAGTGCATCTGGTGCTTATGAGATTGCTGCCTCTGCTGCTTCTTATCTTCATGATCAGACAAGGAGCATACCTTCATTCAAATCTTCTAATGCCGAAGATTCCGTTGTTGGAAGCGTTGACGGTGTTAATGTGAGAAACACAGAGGTTGAGTCTTTGAGGGCGGCAACTACTGATTCAATGAAAGTGATTGCTGCTAATGAGGAAGTAAAGCAGGCTTTGGCTGATGATTTGAAATCTACAAGTTCTTCACCCTGTGAATGGTTCATATGTGATGATGACCAGAGTTCTACAAGGTTTTTTGTGATTCAGGGTTCAGAGTCATTTGCATCCTGGCAGGCAAACGTACTTATTGAGCCAGTTCAATTTGAGGGGTTGGATGTCCTTGTTCATAGGGGTATATATGAGGCTGCTAAAGGGACATATCAACAGATGTTTCCAGAGATTCATGCTCATCTAAAATCTCGTGGTTCTCGTGCAACTTTCCGTTTCACTGGCCATTCTCTTGGAGGGAGTTTGGCATTACTTGTAAATCTTATGCTTTTGATAAGGAATGAAGTGCCAATGTCCTCTCTGCTTCCTGTGATAACCTTTGGCTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAGACAAGCTAGGATTGCCACGGAGTCATGTCCAGGCAATTACAATGCACAGAGACATAGTACCAAGAGCATTCTCTTGCAAGTACCCTAACCACGTTGCAGAACTACTAAAGGCTATTAATGGCAACTTACGTGGTCATCCTTGTCTTAATAACCAGAAGCTATTATATGCACCAATGGGTGAACTTCTGATTCTACAGCCAGATGAGAAGTTTTCACCAAGCCATCATCTCCTGCCCTCAGGTAGTGGTTTATATCTTTTAAGTGGTCATCTATCAGAATCCAATGACACAGACAAGCAGCTCCAAGCTGCTCAGTTGGTCTTCCTGAACTCACCACATCCACTGGAGATATTAAGTGACCGATCTGCCTATGGATCTGGAGGGGACATACAGAGAGATCATGACATGAAATCCTACTTGAGTTCCGTGAGAACTGTGATTCGCCAAGAACTTAACCAGATCCGTAAGGAAAGGAGAGAGCAACGACGAAAGCTGTGGTGGCCCCTTGTGGCAAAACGTGGAAGTGATGCCAGCATTGTTGTTGGGAGATCCATGGTATCAATCAATATGATTCAAGACCAGGTTCCCTTCTCGGGCATTATACAGACAGGTAGAGAGTCCTTGAAAAGGTTCGGTAGGCTTGTTGCGTCCCAACACATGCAATTTTTTGTAGTGCTCTTGTTTCCTGCACGGTTGTTACTCTTGGAAGCATATAACTTGATCAGATTAAGATGA 2085 0.4384 METLCLQSGISGIASSSSIPITAATSRANEYAPQSQVSALGRSLFSRFSFRYPLKSLWPRPTGGYKGLAIDDAVLEEKPEGNQEDGQNGNWVFKIFHVKSIIWRGEQRNDANDEEEEEIVTNDETDEEEEECDDCRVDDEEEVQFDRDTFSRMLRRVSLTEARLYAQMSHLGNLAYSIPEIKPGNLLKKCGLRFVTSSIEKKELASSGEKNQASAEIQKEESNEKDGGERKEEKNGGSKTSASGAYEIAASAASYLHDQTRSIPSFKSSNAEDSVVGSVDGVNVRNTEVESLRAATTDSMKVIAANEEVKQALADDLKSTSSSPCEWFICDDDQSSTRFFVIQGSESFASWQANVLIEPVQFEGLDVLVHRGIYEAAKGTYQQMFPEIHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRNEVPMSSLLPVITFGSPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHVAELLKAINGNLRGHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGHLSESNDTDKQLQAAQLVFLNSPHPLEILSDRSAYGSGGDIQRDHDMKSYLSSVRTVIRQELNQIRKERREQRRKLWWPLVAKRGSDASIVVGRSMVSINMIQDQVPFSGIIQTGRESLKRFGRLVASQHMQFFVVLLFPARLLLLEAYNLIRLR* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03728 694 Pfam Lipase (class 3) 340 476 IPR002921 GO:0006629
Rops8g03728 694 MobiDBLite consensus disorder prediction 111 131 - -
Rops8g03728 694 SUPERFAMILY alpha/beta-Hydrolases 321 507 IPR029058 -
Rops8g03728 694 Coils Coil 594 614 - -
Rops8g03728 694 MobiDBLite consensus disorder prediction 214 237 - -
Rops8g03728 694 MobiDBLite consensus disorder prediction 107 131 - -
Rops8g03728 694 CDD Lipase_3 323 472 - -
Rops8g03728 694 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 32 683 IPR043367 GO:0008970
Rops8g03728 694 MobiDBLite consensus disorder prediction 201 243 - -
Rops8g03728 694 Gene3D alpha/beta hydrolase 283 506 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03728 Rops-Chr8 77684997 77688624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03728 1 694 Acyl Lipid Metabolism Gene Families AT1G02660 55.601 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03728 - - gmx:100788786 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03728 8 77684997 77688624 Rops8g03728 8 77684997 77688624 ECH
Rops8g03728 8 77684997 77688624 Rops6g02093 6 39036810 39040634 PCT