Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02093 ATGGAAACTATGTGTTTGAAAAGTGGGATAGTTCCCTCGATCTCTATTGGTGCTTCTCTGGATGCACGTGCCAACGCTTCTCAGGTGAGCACGGTCTGTCGCTCCGCCGCGGATAAACCGCCGCAAAAGTCACTGTTTTCCAGATTCTCTTTTAGTTACCCTTTGGAATCTCTCTGGCCACGGGGAGAAAGGAATAGAAGGTTCAGTGGACTGGCCCTCGACGATGCCGTTTTGACGGAGAACGGCGAAGGGAAGGCCGTGAGAGACGACCGCGAGGATGAAACGGCGAATGGCACGGAGGGGCAGAGGGGAAACTGGGTTTTGAAGATTTTGCATGTGAAGTCTGTGTGGAAGAGGGAACAGGGGAACGGTGATGAAGGAAATGAAGGGGAGGATGATCAAACCAATGAAGATGAAGAGGTTTGTGATGCTTGCACTGTTGATGATGAAGAAGAAGAGGTTCAATTCGATAGAGACTCGTTTTCTAGAATGCTACGGAGGGTGTCGTTAGCCGAAGCAAGGTTTTATGCGCAGATGTCACACTTGGGGAGCTTGGCATACTCTATACCCAAAATCAAGCCAGGGAAACTCTTAAAACATTATGGTCTGCGTTTTGTAACTTCATCGCTAGAGAAGAAGGAATTGGCAGCAACAGCCGAAAAAAATCCTCAGGAAGTTGAAACTAATGAGAAGGAAGAAGAAGAGAAAAAGGAGCAGAAGAACGGTGGATACAAGATTAGTGCAGCTGCTGCTTATAATATTGCTGCTTCTGCTGCCTCTTATCTGCATGCTCAGACTAGAACCATACTTCCATTCAAATCTTCAAATGCTGCAGCTGGTGAAGGTTCACTTGAAAGAAGCTATGAAAGCCTTGACGGTCTCGACATGTTAAACACCGAGGTGGCATCTTTGATGGCAACTACCGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCAACTCATTCATCACCCTGTGAATGGTTCATCTGTGATGATGACCAGAATAGTACAAGATTTTTTGTAATTCAGGGTTCCGAATCATTGGCATCCTGGCAAGCAAACCTACTTTTTGAGCCGGTTAAATTTGAGGGGTTGGACGTCCTTGTGCACCGGGGTATTTATGAGGCTGCTAAAGGGATATATCAACAGATGTTACCGGAAGTTCATGCTCACCTTAAATCTAAAGGCTCTCGTGCAACTTTCCGTTTCACTGGGCATTCTCTTGGTGGAAGCTTGGCATTACTAGTAAATCTCATGCTGCTGATAAGAAAAGAAGTGCCAATGTCGTCTTTACTTCCTGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAGACAAGCTAGGTTTGCCACGGAGTCATGTTCAGGCAATTATGATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAATTACCCTGATCATGTCGCAAGACTACTGAAGGCTGTCAATGGGAACTTCCGTAATCATCCTTGTCTCAATAACCAAAAGCTACTATATGCACCAATGGGTGAACTTCTGATTCTACAGCCAGATGAGAAATTTTCACCAAGCCATCATCTCCTGCCATCAGGCAGTGGGTTATATCTTTTATGTTGTCCTTTGTCAGAATCCGATGACACAGACGAGCTGCTCCGATCTGCTCAATTGGTCTTCTTGAACTCACCTCATCCACTTGAGATCTTAAGTGACCGATCTGCTTATGGATCTGGAGGAACCATACAAAGAGACCATGACATGAATTCCTACTTAAGGTCTGTCAGAACTGTAATTCGCCAAGAACTTAACCAAATCCGTAAAGCAATGAGAGAGCAACGGCGTAAAGTGTGGTGGCCTCTTGTGTTACCACGTGGAATTGATGCCCACATTGTTGTTGGGAGGTCCATGATATCAGTTAATATGGGTCAACGCCAGTCCTCTTTCTCTGGCATGATTCAAACTGGGAGAGAGACCTTGAAAAGGTTCAGTAGATTTGTTGCGTCACAACACATGCATTTGTTTGTGTTGCTCTTATTCCCTGCTAGGTTGTTACTCTTGGGGGCATATAGCGTGATTAGTCCCAGATGA 2121 0.455 METMCLKSGIVPSISIGASLDARANASQVSTVCRSAADKPPQKSLFSRFSFSYPLESLWPRGERNRRFSGLALDDAVLTENGEGKAVRDDREDETANGTEGQRGNWVLKILHVKSVWKREQGNGDEGNEGEDDQTNEDEEVCDACTVDDEEEEVQFDRDSFSRMLRRVSLAEARFYAQMSHLGSLAYSIPKIKPGKLLKHYGLRFVTSSLEKKELAATAEKNPQEVETNEKEEEEKKEQKNGGYKISAAAAYNIAASAASYLHAQTRTILPFKSSNAAAGEGSLERSYESLDGLDMLNTEVASLMATTDSVTAVVAAKEEVKQAVADDLNSTHSSPCEWFICDDDQNSTRFFVIQGSESLASWQANLLFEPVKFEGLDVLVHRGIYEAAKGIYQQMLPEVHAHLKSKGSRATFRFTGHSLGGSLALLVNLMLLIRKEVPMSSLLPVITFGSPSIMCGGDSLLDKLGLPRSHVQAIMMHRDIVPRAFSCNYPDHVARLLKAVNGNFRNHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESDDTDELLRSAQLVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRSVRTVIRQELNQIRKAMREQRRKVWWPLVLPRGIDAHIVVGRSMISVNMGQRQSSFSGMIQTGRETLKRFSRFVASQHMHLFVLLLFPARLLLLGAYSVISPR* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02093 706 MobiDBLite consensus disorder prediction 126 140 - -
Rops6g02093 706 SUPERFAMILY alpha/beta-Hydrolases 335 518 IPR029058 -
Rops6g02093 706 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 28 695 IPR043367 GO:0008970
Rops6g02093 706 MobiDBLite consensus disorder prediction 216 241 - -
Rops6g02093 706 Coils Coil 606 626 - -
Rops6g02093 706 CDD Lipase_3 335 493 - -
Rops6g02093 706 Pfam Lipase (class 3) 352 489 IPR002921 GO:0006629
Rops6g02093 706 MobiDBLite consensus disorder prediction 82 98 - -
Rops6g02093 706 Gene3D alpha/beta hydrolase 298 519 IPR029058 -
Rops6g02093 706 MobiDBLite consensus disorder prediction 82 101 - -
Rops6g02093 706 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02093 Rops-Chr6 39036810 39040634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02093 1 706 Acyl Lipid Metabolism Gene Families AT1G02660 58.887 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02093 - - gmx:100807834 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02093 6 39036810 39040634 Rops6g02093 6 39036810 39040634 ECH
Rops8g03728 8 77684997 77688624 Rops6g02093 6 39036810 39040634 PCT