Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03657 ATGGCCACCCTTTCCGCTTGTGCTTCCCCTCCTTGGCCAAACCCTAATCCTAATAACCCTAATTCTAATCCAAACCCTAATTTCCTCCCCGAACAATCCCAAACCCTCGACTTCGATTCCCTCATGTCTCCTCAACCTCAAACCTCACCCCACCACTCTCCCACTGCTTCGCCGGAATCTTCCCCTGCTCCTCCGCCTCCGTCCCTCCTTCATCTCTCCTTCAACCAAGATCACGCCTGCTTCGCCGCCGCCACCGACAACGGCTTCCGCATCTACAACTGCGACCCCTTCCGTGAGCTCTTCCGTCGAGAATTCGACGGCGGCGGAATCGGCCACGTGGAGATGCTCTTCCGCTGCAACATATTAGCCCTCGTCGGCGGTGGGTCCCACCCTCAGTACCCTCCCAACAAGGTCATGATCTGGGACGACCATCAAGGCAGGTGCATTGGCGAGTTATCATTCCGAGCCGCCGTTCGCGGCGTCCGTCTCCGCCGTGACCGTATAATCGTCGTTGTGGAGCAGAAGATATTCGTTTACAACTTCGCTGACCTTAAGCTGTTGCACCAAATTGAGACCATTGCGAACCCTAAAGGGCTTTGTGCAGTTTCACACTTGTCTGATTCTCTTGTTCTCGCGTGCCCTGGTTTGCATAAGGGTCAGATTCGCGTTGAGCACTATGCGCAGAAGAAGACAAAGTTCATTTCAGCACATGATTCTAGAATTGCTTGTTTCGTTCTCACACTTGATGGGCAGTTACTTGCCACCGCCAGCACCAAGGGTACACTGATTCGGATTTTTGATACGGATAATGGCACGCTACTTCAGGAAGTAAGAAGGGGTGCAAATGCTGCGGAGATCTATAGTTTGGCGTTCTCTTCTACTGCTCAGTGGTTAGCAGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGTTAATTCCAGTGTACCTGAGCATGAAAAGTCACAAAGTTCAACAAATTCAGAAGCTGCCATTACCCCGTCTAGCTCATCTCGCTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCTAAGTTTCACTTACATGAAGGCATTCATTACACTGTCGCCTTTGGTCTCCAAAAGAACACAGTCATAATTCTCGGCATGGATGGAAGCTTCTATCGATGCCAATTTGATCCAGCGCATGGAGGGGAGATGACTCAGCTGGAATATCATAACTTTTTAAAGCCAGAAACAGCCTTGTGA 1260 0.4992 MATLSACASPPWPNPNPNNPNSNPNPNFLPEQSQTLDFDSLMSPQPQTSPHHSPTASPESSPAPPPPSLLHLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFDGGGIGHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGRCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFADLKLLHQIETIANPKGLCAVSHLSDSLVLACPGLHKGQIRVEHYAQKKTKFISAHDSRIACFVLTLDGQLLATASTKGTLIRIFDTDNGTLLQEVRRGANAAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSSVPEHEKSQSSTNSEAAITPSSSSRSFIKFKGVLPKYFNSEWSVAKFHLHEGIHYTVAFGLQKNTVIILGMDGSFYRCQFDPAHGGEMTQLEYHNFLKPETAL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03657 419 MobiDBLite consensus disorder prediction 1 69 - -
Rops8g03657 419 MobiDBLite consensus disorder prediction 25 56 - -
Rops8g03657 419 Pfam WD domain, G-beta repeat 280 310 IPR001680 GO:0005515
Rops8g03657 419 Gene3D - 43 393 IPR015943 GO:0005515
Rops8g03657 419 SMART WD40_4 55 93 IPR001680 GO:0005515
Rops8g03657 419 SMART WD40_4 227 267 IPR001680 GO:0005515
Rops8g03657 419 SMART WD40_4 270 311 IPR001680 GO:0005515
Rops8g03657 419 SUPERFAMILY WD40 repeat-like 64 324 IPR036322 GO:0005515
Rops8g03657 419 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 65 412 - -
Rops8g03657 419 MobiDBLite consensus disorder prediction 10 24 - -
Rops8g03657 419 FunFam Autophagy-related protein 18a isoform A 67 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03657 Rops-Chr8 76867570 76870398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03657 K22991 - gmx:100781692 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03657 8 76867570 76870398 Rops8g03657 8 76867570 76870398 ECH
Rops8g03657 8 76867570 76870398 Rops6g01865 6 36482559 36485318 ECH