Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03638 ATGCAACGAAACAATCTTTACGTACGGGGCTATGCAGATGCCAAGCTCTGCTGTGGAAACACCTCAAGAAACTTCCATAGCAATGCATACTGTAATCCTTCCAAATCATCCACAGAAACATTACTCAAGCTAAGGGAACATTTTGCAGTAATGGATAGAGTAAAGGATTTGGCATCAAAGAAGGCAGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGCCATAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCTGCAGTACATGAGCTTGACAATGATTCTTATGGGAGGGAAATGGAATGGGCTTTGAGGGGTTTGGGCTGTAATCCTTCAGTCCCAGCAGTTTTCATAGGTGGAAAATTTGTAGGCTCTTCAAAAGATGTGATATCCCTCCATGTTGATGGCTCTCTCAAACAAATGCTCATGGATGCAAAGGCCATCTGGTTTTAG 459 0.427 MQRNNLYVRGYADAKLCCGNTSRNFHSNAYCNPSKSSTETLLKLREHFAVMDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGLGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMDAKAIWF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03638 152 SUPERFAMILY Thioredoxin-like 51 151 IPR036249 -
Rops8g03638 152 Pfam Glutaredoxin 64 125 IPR002109 -
Rops8g03638 152 PRINTS Glutaredoxin signature 63 81 IPR014025 -
Rops8g03638 152 PRINTS Glutaredoxin signature 108 121 IPR014025 -
Rops8g03638 152 PRINTS Glutaredoxin signature 122 135 IPR014025 -
Rops8g03638 152 ProSiteProfiles Glutaredoxin domain profile. 51 151 - -
Rops8g03638 152 PANTHER GLUTAREDOXIN 51 151 IPR011905 -
Rops8g03638 152 Gene3D Glutaredoxin 42 150 - -
Rops8g03638 152 NCBIfam glutaredoxin-like family 54 151 IPR011905 -
Rops8g03638 152 CDD GRX_GRXh_1_2_like 62 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03638 Rops-Chr8 76560955 76565044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03638 51 152 Miscellaneous Gene Families AT4G15700 50.980 7.48e-36 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03638 K03676 - gmx:100819447 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03638 8 76560955 76565044 Rops8g03638 8 76560955 76565044 ECH
Rops8g03638 8 76560955 76565044 Rops6g02188 6 40321281 40321921 PCT