Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03620 ATGACAGGGCCAGTGATGGTGACAAAGGGTGGTAATTGCGGTGGTGGGAAGGGAAGAAAAGGAGGAAGAGACACCGGAGAAGAGCAAAATCAGGTGTCACCGGCGGCGTTTCTTTTAGCGGCTTTAAGAAAATCAATGGTGGCTTGCAGTGTGGAAAGTCCTGACGATGTAATCTCCACCATTCATCCTATGGAGATTGGATGGCCAACCAACGTTAAGCATGTTAGCCATGTCACCTTTGATCGCTTCAATGGTTTTCTGGGTCTTCCACTTGAGTTAGAGGTTGATATCCCTGCTCCTGTTCCCAGTGCAAGTGTTAGTGTGTTTGGCGTCTCAGCAGAGTCAATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTACTGCTAATGCAGGAGCGGCTATACTCACAGGGAGGCCTAAAGGCTGAAGGTATTTTCCGCATAAACCCAGAAAACAGTCAAGAAGAGCATTTGAGGGACCAGTTGAATAGGGGCATTGTGCCAGATGACATTGATGTTCATTGCTTGGCAAGCCTAATTAAAGCTTGGCTCAGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATTTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCAGCCTTGCTCCACTGGGCTATTGATCTTATGGCTGATGTTGTAGAAGAAGAGGAGTATAACAAAATGGATGCAAGAAATATTGCAATGGTTTTTGCACCAAATATGACTCAGATGTCTGATCCACTAACTGCACTGATGCATGCGGTCCAAGTGATGAATTTACTAAAGACTCTGATACTGAAGACACTTAGAGAACGTGAAGAAACAGCAACAGAAGGATCTTCACCCATGTCATTTCATTCATCAGATAGCCAATCTGAGGATGACTATGACAGTCAGCAAGAAATGGATACCAGTGGTGAATTGAGAAGGACCAAGTCAGATTATGAAGATCATGTTAACTATAACAATAACATTGAAGAGGAAGAGGAGGCTGCATCTATAAGTGAGATAGAGGAATGCTTCTTGAAGCGGTTGGATGAGAACACAAAAGGATTCTCAGAAGAACCCGCGCAAGAGGAGTTAGAGAGCCCCAGGAGTTGCTCTGGTTGTCACATGGAATCTGTTATATCATTTACTGATACCAAAACTGAGAATTCCAGTCCAAGTTCTTCATATGGAGATGACTCAAGAACAACACTGACTGCTGAGGGATCAAATGTTGACCCAAGTACTCCATCAAGAGAAAGTACAGGCACCAGTGATGTGGAAATGATGATGGATGATAAATTTATAGATTCTGTTTCATTAGTGCCACTATTTGCATCTAGTTAA 1389 0.4363 MTGPVMVTKGGNCGGGKGRKGGRDTGEEQNQVSPAAFLLAALRKSMVACSVESPDDVISTIHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVDIPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEHLRDQLNRGIVPDDIDVHCLASLIKAWLRELPSGVLDGLSPEQVLQCNTEEEFVELVKQLKPTESALLHWAIDLMADVVEEEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLREREETATEGSSPMSFHSSDSQSEDDYDSQQEMDTSGELRRTKSDYEDHVNYNNNIEEEEEAASISEIEECFLKRLDENTKGFSEEPAQEELESPRSCSGCHMESVISFTDTKTENSSPSSSYGDDSRTTLTAEGSNVDPSTPSRESTGTSDVEMMMDDKFIDSVSLVPLFASS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03620 462 MobiDBLite consensus disorder prediction 397 444 - -
Rops8g03620 462 MobiDBLite consensus disorder prediction 397 439 - -
Rops8g03620 462 CDD CRIB 64 94 - -
Rops8g03620 462 ProSiteProfiles CRIB domain profile. 66 79 IPR000095 -
Rops8g03620 462 ProSiteProfiles Rho GTPase-activating proteins domain profile. 111 292 IPR000198 GO:0007165
Rops8g03620 462 Pfam P21-Rho-binding domain 65 97 IPR000095 -
Rops8g03620 462 Gene3D CRIB domain 62 96 IPR036936 -
Rops8g03620 462 PANTHER MKIAA1688 PROTEIN 25 361 IPR044785 GO:0005096
Rops8g03620 462 SMART RhoGAP_3 125 288 IPR000198 GO:0007165
Rops8g03620 462 SMART PBD_5 66 100 IPR000095 -
Rops8g03620 462 FunFam Rho GTPase-activating protein 5 96 289 - -
Rops8g03620 462 MobiDBLite consensus disorder prediction 291 334 - -
Rops8g03620 462 Pfam RhoGAP domain 128 262 IPR000198 GO:0007165
Rops8g03620 462 SUPERFAMILY GTPase activation domain, GAP 107 285 IPR008936 -
Rops8g03620 462 Gene3D Rho GTPase activation protein 98 291 IPR008936 -
Rops8g03620 462 MobiDBLite consensus disorder prediction 1 30 - -
Rops8g03620 462 CDD RhoGAP 128 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03620 Rops-Chr8 76300367 76303501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03620 - K20642 gmx:100812700 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03620 8 76300367 76303501 Rops8g03620 8 76300367 76303501 ECH
Rops8g03620 8 76300367 76303501 Rops6g02208 6 40509504 40512522 PCT