Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02208 ATGGTGACCAAGGGCGGTGGATGCGGTGGTGGAGGGAAGAGAACGAGAACAGCTCGAACTGCCGAAGAAGAAGAAGAAGAGCAGAACCAGCTCTCTCTGGTGGCGTTTCTTTTAGCGGCACTTAGAAAATCCATGGTGGCTTGCAGGGTGGACCGACCTGACGATGTAATCTCCACCGTTCATCAAATGGAGATCGGATGGCCAACAAATGTTGAGCACATCACTCATGTCACCTTCGATCGCTTCAATGGCTTTCTCGGTCTCCCCGTTGAGTTCGAGGTCGAGATCCCTGGTCGGGTTCCCAGTGCTAGCGTAAGTGTGTTTGGCGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCTTGCTAATGCAGGATCGTTTATACTCTCAGGGAGGCTTAAAGGCTGAAGGTATATTTCGCATAAACCCAGAAAATGGACAAGAGGAGCATGTGAGGAACCAGTTGAATAGGGGCATTGTGCCAGATGACATCGATGTTCACTGCTTGGCTGGGCTAATCAAAGCCTGGTTCCGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATCTATTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGAGGAGGAGTTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCCGATCCTCTAACCGCTCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTGATAATGAAGACACTTAGAGAACGTGAAGAAACAGCAACAGGTGGATATTCACCCATGACCTTTCATTCATCAGATCGCCAGTCTGAGGATGAATTTGACGGTCAGCAAGAAATGGACACCAGCGGTGAATTGAGAGGGACCAAATCAGATTATAATGACAATGCTCACTACGGCAATAGCAGTGAAGAGGAAGAGGAGGCTGAATCTTTGACCGAGATAGAGGAATGCTTCTTGAAGCAGTTGGATGAGAACACAAAAGGATTCTCTGAAGAACCTGCAGGTTATTTGCAAGAGTATGTGAGCCCCAGAAGTTGCTCTGGCTATAGGGTGGAACCTGCTATATCAATTACTGATAGCAAAACAGGTAATTCCTGCTTGAGTTCCACTAACCAAGAAATGTTGAGGACAACACTGAGTGGTTTGGGCTCAAATGTTGACAAAAGTAGTCCATCAGTAGGATGGACAGGCACCAAAGATGTGGAGATGATGGATAAATTTACAGATTCTGTTTCACCAGTGCCACTGCTTGCATCCAGTTAA 1386 0.4618 MVTKGGGCGGGGKRTRTARTAEEEEEEQNQLSLVAFLLAALRKSMVACRVDRPDDVISTVHQMEIGWPTNVEHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENGQEEHVRNQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESIELVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMTFHSSDRQSEDEFDGQQEMDTSGELRGTKSDYNDNAHYGNSSEEEEEAESLTEIEECFLKQLDENTKGFSEEPAGYLQEYVSPRSCSGYRVEPAISITDSKTGNSCLSSTNQEMLRTTLSGLGSNVDKSSPSVGWTGTKDVEMMDKFTDSVSPVPLLASS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02208 461 FunFam Rho GTPase-activating protein 5 95 288 - -
Rops6g02208 461 CDD RhoGAP 127 283 - -
Rops6g02208 461 ProSiteProfiles Rho GTPase-activating proteins domain profile. 110 291 IPR000198 GO:0007165
Rops6g02208 461 SMART RhoGAP_3 124 287 IPR000198 GO:0007165
Rops6g02208 461 PANTHER MKIAA1688 PROTEIN 16 350 IPR044785 GO:0005096
Rops6g02208 461 Pfam RhoGAP domain 127 261 IPR000198 GO:0007165
Rops6g02208 461 Gene3D CRIB domain 60 96 IPR036936 -
Rops6g02208 461 MobiDBLite consensus disorder prediction 293 352 - -
Rops6g02208 461 Pfam P21-Rho-binding domain 64 93 IPR000095 -
Rops6g02208 461 ProSiteProfiles CRIB domain profile. 65 78 IPR000095 -
Rops6g02208 461 SUPERFAMILY GTPase activation domain, GAP 106 284 IPR008936 -
Rops6g02208 461 MobiDBLite consensus disorder prediction 1 25 - -
Rops6g02208 461 Gene3D Rho GTPase activation protein 97 291 IPR008936 -
Rops6g02208 461 SMART PBD_5 65 99 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02208 Rops-Chr6 40509504 40512522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02208 - - gmx:100807134 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02208 6 40509504 40512522 Rops6g02208 6 40509504 40512522 ECH
Rops8g03620 8 76300367 76303501 Rops6g02208 6 40509504 40512522 PCT