Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03613 ATGAACAAAAATGGCTTGTTTCCACCATTGATGAAGCTCCAATGGAGGGGCATAGCGAAAGTGCGTCTGAAATGGGTGAAGAATCGAAGCTTCGACCACATCATCGACAAGGAAACCGATATCAAAGCCGCTTCACTCCTCAAAGACGCTATCAAACGCTCCTCCACCGGTTTCCTCACTGCCAAATCCGTCGCTGATTGGCAGAAGCTTCTAGGCCTCACCATCCCCGTCCTTCGATTCATGCGAAGATACCCCACTCTCTTCGATGAATTCCCTCACCCTCGATGGAACTCCTTGCCCTGTTTCCGTTTAACCGATACCGCACAACTCTTAGACTCTCAAGAACACACAATTCACACCAACCACGAAAACGACGCCGTTGAAAGGCTCTGCAAATTGTTCATGATGACCAAAACTCGCACAGTTCCACTTCAGTCACTTCACCCTCTCAAATGGGACCTGGGTTTACCCGATCTTTTCCACAAAACCCTAATTCCCAAATACCCTAACCACTTTCAGTTTGTAAAAGCCTCCAACGGTGTCTCCGCTCTGAAATTATCACATTGGTGTGGGGAATTTGCGGTTTCGGCGTTGCAGAAGAGCAATGAGAGTGGGAGTGATGGTGGGTATAGGGATTTCAAGAGAGGAAAATCGGCGTTGGTTTTTCCGATGAGGTTTCCGAGGGGTTATGGGGCTCAGAAAAAGGTGCGGGCTTGGATGGAGGAGTTTCAGAAATTGCCTTATATTTCACCCTATGAAGATTCATCTAATATTGATGCTACGAGTGATTTGATGGAGAAACGTGTTGTCGGGGTTTTGCATGAGTTTTTGAGTTTGACTTTGCATAAGAAAACTAAAAGGAACTACTTGAGAAGCTTGAGGGAAGAGTTGAATCTCCCACATAAGTTTACAAGGATTTTCACTAGATATCCAGGGATATTTTATCTCTCTTTGAAGTGTAAAACAACCACAGTTACTCTTAGGGAAGGGTACCAGAGTGGGAAACTAGTGGACCCACATCCTCTTGCTCGACATAGAGATAAGTTCTATCATGTAATGAGGACGGGGCTTCTTTATCGTGCTGATGGATCAAACTTGAAACCTGAGGAAGAAGCTTTACTGCTTGATAATGTGCCAAGTGATGAAGTGAGGAATGAAGATTCTGAGGAGGAAGAGGTTGAAACAAGTGATGAATTTTATGAGGATGAAGTTTCAGAGTCAGATTAA 1227 0.4474 MNKNGLFPPLMKLQWRGIAKVRLKWVKNRSFDHIIDKETDIKAASLLKDAIKRSSTGFLTAKSVADWQKLLGLTIPVLRFMRRYPTLFDEFPHPRWNSLPCFRLTDTAQLLDSQEHTIHTNHENDAVERLCKLFMMTKTRTVPLQSLHPLKWDLGLPDLFHKTLIPKYPNHFQFVKASNGVSALKLSHWCGEFAVSALQKSNESGSDGGYRDFKRGKSALVFPMRFPRGYGAQKKVRAWMEEFQKLPYISPYEDSSNIDATSDLMEKRVVGVLHEFLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQSGKLVDPHPLARHRDKFYHVMRTGLLYRADGSNLKPEEEALLLDNVPSDEVRNEDSEEEEVETSDEFYEDEVSESD* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03613 408 MobiDBLite consensus disorder prediction 383 408 - -
Rops8g03613 408 Pfam Plant organelle RNA recognition domain 26 356 IPR021099 GO:0003723
Rops8g03613 408 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 390 IPR045040 GO:0003723
Rops8g03613 408 MobiDBLite consensus disorder prediction 371 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03613 Rops-Chr8 76223055 76224281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03613 - - gmx:100808403 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03613 8 76223055 76224281 Rops8g03613 8 76223055 76224281 ECH
Rops8g03613 8 76223055 76224281 Rops6g01380 6 29389865 29391409 PCT