Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01380 ATGCTCCTCTGCAGTGCGGCTATGTTCTCCAAAACCAAAAAAATCTACGCTTTCTCCTCCTACTTTGAGAAGAATCTGAAGCTGAACCTTGAAGTAAGATCAATATCCAGCCTCAAAGTAGTGTGGCGCAAAGACCCAGCACTAGACAGAGCCATAGATAACGATAAGCGTTATAAGCAATGTGCCCGTGTTGTGAAGGAGGTTCTCAATGAACCGGGTCAAGTTATCCCTCTTCGTTACCTCGAGAAACGCCGCGAAAGGATGCGTCTTAAGGTGAAAGTCGAACCCTTTTTGAATCAAAACCCTTCCTTGTTTGATGTCTACTTTGATCGCATCAAACCAAAAACACAACCTGTTCGGTTTCTTCGTGTCAGTGACAGGCTTAAGCAATTTCTGGAGGAAGAGAAAAGGATTTTTAAGGAGAATGAGCCCTTGATTGTGTCCAAGTTGTGTAAATTGTTGATGATGTCTAAGAATAAGGTTGTTAGTGCTGATAAATTGCTTCATGTGAAGAGGGAGTTTGGTTTCCCTAATGATTTTTTGGTTGATTTGGTTCCTAGATACCCACAATATTTTAGGCTAACTGGGTTACCTGGAGAGGGAAAATCGTTTCTTGAATTGGTTTCTTGGAACCCCGAGTTTGCAAAATCTGTTATTGAACAAAGGGCTGAGGAGGAGAGTAGGTGTATGGGGATAAGGGTTAGGCCTAATTTCAATGTAGAGCTTCCATCAGGGTTTGTGTTGAAGAAGGAAATGAGGGAGTGGGTTAGGGATTGGATTGATCTTGATTATATATCCCCTTATGTGGATGTGTCTCATTTGGATCAAGCTTCTAGAGAGATGGAGAAAAGGACAATTGGGGTGTTCCATGAGCTGCTTTCCCTTTCCTTGTATAAGAGGATTCCTGTGCCAATCCTAGGAAAGTTTTGTGAAGAATATAGGTTTTCAAATGCATTTTCAACTGCTTTTACAAGGCATTCAGGCATATTCTATATGTCCTTGAAAGGTGGGATTGAAACAGCAATGTTGAGAGAAGCATACAAAGGTGATAAGTTGATTGACCTGGATCCACTGCTACAGATCAAAGATAAATTTGTTGAGTTGTTGGAGGAGGGTTGGCGGCGAAGAGCAGAGGAGTTGAGGTTTAAACAAGAGAGAATTAAGAAAGATATGGAACTTATGGCCACGAAAGTTAGTGAATGA 1203 0.4148 MLLCSAAMFSKTKKIYAFSSYFEKNLKLNLEVRSISSLKVVWRKDPALDRAIDNDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKVKVEPFLNQNPSLFDVYFDRIKPKTQPVRFLRVSDRLKQFLEEEKRIFKENEPLIVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPQYFRLTGLPGEGKSFLELVSWNPEFAKSVIEQRAEEESRCMGIRVRPNFNVELPSGFVLKKEMREWVRDWIDLDYISPYVDVSHLDQASREMEKRTIGVFHELLSLSLYKRIPVPILGKFCEEYRFSNAFSTAFTRHSGIFYMSLKGGIETAMLREAYKGDKLIDLDPLLQIKDKFVELLEEGWRRRAEELRFKQERIKKDMELMATKVSE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01380 400 Pfam Plant organelle RNA recognition domain 44 373 IPR021099 GO:0003723
Rops6g01380 400 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 35 385 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01380 Rops-Chr6 29389865 29391409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01380 - - lang:109336290 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01380 6 29389865 29391409 Rops6g01380 6 29389865 29391409 ECH
Rops8g03613 8 76223055 76224281 Rops6g01380 6 29389865 29391409 PCT