Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03555 ATGGATATTGAGTCAACAATGCAAGTAAACAAGGCTGGATTTTTTGCTCGCTGGGGGGATTCCCTTAAGGCTTTGCCTAGGAACTTCAAGTCCAAGGTTATGAACGCCATAAGGAATATAAAGAAGATTGGACAAGATGACCCCAGAAGAGTAACTCACTCATTAAAAGTGGGACTTGCTCTCACATTGGTGTCCTTGTTTTACTACTCGAGGCCTCTTTATGATGGCTTTGGAGTTGCAGGAATGTGGGCTGTTCTCACTGTGGTGGTAGTATTTGAATTCACCGTAGGAGCAACCCTCGGTAAAAGTATAAATAGAGGATGTGCTACATTATTAGCTGGTGCTTTAGGGGTTGGAGGTCACCACTTAGCTACAACTTTTGGAGAAAGAGGAGAACCTATTGTCCTTGGGACCCTTGTCTTTATTTTAGTTGCAGGGTCTACATTTTGTAGATTTTTTCCTAAGATCAAGGCAAGATATGACTATGGAGTGGTGATATTTATATTGACATTCTGTTTGGTCACTGTCTCTGGGTACAGAGTGGAGCAACTCTTTGAGCTAGCCCATCAGAGACTTGCAACAATTTTAATAGGGGTTTCAACCTGCATGATCATCTCCATATTCGTTTGTCCAGTGTGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTCCAATATAGAAAAGCTAGCAAATTACCTAGAAGGATTCGAAGGCGAATATTTTCATTGCTCAGAGGATAAAGAAAAATCTGAGTCACTTCTCCAAGGATATAAAAATGTCCTCAATTCCAAAGCAAATGAAGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCAGGACATGGTGGTTTTAAACGTCGTCATCCTTGGAAGCAGTACTTGAAGATTGGAGCACTTGCTCGGGAATGTGCTTACAAGATTGAAACTCTCAATAGCTACCTCAATCTTGAAATCCAAGCATGTTTGGAATTCAAGTGTAAAGTTCAAGAACCATGCCTTAAGATATGTTCAGAGTCCAACAAGGCATTAAAGGCAATATCTTCATCAATCAAAACAATGACAGACCCATCAGCCACTAAAAGCCACACAGAAAATTCAAAAACTGCAATTAAAGACCTCAAAATTGCAATGGAAAATGTTTCTTTAGAAGACATGGAACTCTTAGCTATTATCCCAGTTGCCTCAGTAGCAGCATTACTTGAAGAAATCACAAAATCCGTGGAGAAAATTTATGAATCTGTTTCTGAGCTTTCTCATTTAGCCCATTTCAAGAGTGTAGAACCCAATCTCTCACCAGAGAAGCCACCCCTTCTTCATCGAGGAATCATAGAACCTATTGTGGACATTGATAACGCTGACCATGTTGAAATTACAATCCATGAGATAAGTACAGACTCACCAGAAGAAAAAAAAGCACCACCAAAACTGTAA 1428 0.4048 MDIESTMQVNKAGFFARWGDSLKALPRNFKSKVMNAIRNIKKIGQDDPRRVTHSLKVGLALTLVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFTVGATLGKSINRGCATLLAGALGVGGHHLATTFGERGEPIVLGTLVFILVAGSTFCRFFPKIKARYDYGVVIFILTFCLVTVSGYRVEQLFELAHQRLATILIGVSTCMIISIFVCPVWAGEDLHKLVASNIEKLANYLEGFEGEYFHCSEDKEKSESLLQGYKNVLNSKANEESLANLARWEPGHGGFKRRHPWKQYLKIGALARECAYKIETLNSYLNLEIQACLEFKCKVQEPCLKICSESNKALKAISSSIKTMTDPSATKSHTENSKTAIKDLKIAMENVSLEDMELLAIIPVASVAALLEEITKSVEKIYESVSELSHLAHFKSVEPNLSPEKPPLLHRGIIEPIVDIDNADHVEITIHEISTDSPEEKKAPPKL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03555 475 Pfam Aluminium activated malate transporter 42 417 IPR020966 GO:0015743
Rops8g03555 475 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03555 Rops-Chr8 75497541 75499545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03555 1 460 Miscellaneous Gene Families AT3G11680 55.626 1.16e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03555 K25841 - gmx:100170704 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03555 8 75497541 75499545 Rops8g03555 8 75497541 75499545 ECH
Rops8g03555 8 75497541 75499545 Rops6g01367 6 29277580 29279788 PCT