Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03546 ATGTCGGAAAAGCACTGTCACCATCACAAGGGAAAGAAGCGCAAACTCTTCAAGCGCATCTTCTGGGGCCTTGTGATCTTGGCGTTCATAGTCTTAGTGATGGTTCTGATAATCTGGGCAATCCTTAAGCCTTCAAAACCTTCCTTCATCCTCCAAGACGTCACCGTTTACGCCTTCAACGCCACCGTACCCAACTTCCTCACCTCAAATTTCCAAGTAACCCTTTCTTCCCGCAATCCCAACGACAAAATCGGAATCTACTACGACAGTCTCGATGCTTACATCACCTACCAGAGCCAACAAGTCACCTACCGCACCGCCATCCCTCCGTCGTATCAGGGCCACAAAGAAATGGACGTGTGGTCCCCTTTTGTCTACGGCACCAACGTTCCTGTCGCTCCCTACAACTTCGCTGGTCTCAGCCAGGATCAGACTAACGGTAACGTCCTCGTTATCATTAAGGTTGACGGCAGGGTTCGGTGGAAGGTTGGTACCTTTATCTCTGGTCGTTACCATCTCTATGTCCGTTGCCCTGCTTTCATCACCTTCGGGCCCAATAGCAATGGGATCGCCGTCGGTGATAACGCCATTAAGTATCAGCTAGTCCAGCGTTGCACCGTTAGCGTTTGA 630 0.5063 MSEKHCHHHKGKKRKLFKRIFWGLVILAFIVLVMVLIIWAILKPSKPSFILQDVTVYAFNATVPNFLTSNFQVTLSSRNPNDKIGIYYDSLDAYITYQSQQVTYRTAIPPSYQGHKEMDVWSPFVYGTNVPVAPYNFAGLSQDQTNGNVLVIIKVDGRVRWKVGTFISGRYHLYVRCPAFITFGPNSNGIAVGDNAIKYQLVQRCTVSV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03546 209 PANTHER OS05G0367900 PROTEIN 17 199 IPR044839 GO:0098542
Rops8g03546 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03546 Rops-Chr8 75304571 75305596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03546 - - gmx:100795832 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03546 8 75304571 75305596 Rops8g03546 8 75304571 75305596 ECH
Rops8g03546 8 75304571 75305596 Rops6g00802 6 20633745 20634374 PCT