Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00802 ATGTCGGTGAAGGAGTGCGAACACCACAGGGGATGGAAGAGAAGGATCTTCCGTCGCATATTCTGGACCATCATCGTAATCCTCTTCATCATACTCGTCACAATCCTTCTCATATGGGCAATCCTAAAACCCTCAAAACCATCCTTCATTCTCCAAGACGTCACCGTTTATGCCTTCAACGCCACCGTACCAAACTTCTTAACTTCCAATTTCCAAGTCACTCTCGTTTCACGCAACCCAAACGACCACATCGGAATCTACTACGACCGTCTCGATACCTATGTCAATTACCGTAGCCAACAGATAACCTACCGAACCGGTATCCCTCCTTCTTACCAAGGCCACAAAGAGTCAAACGTTTGGTCACCGTTTGTTTACGGCACCAACGTCCCCGTTGCTCCCTTCATCTTCGCTGGCCTCGCACAGGACCAGTCTAACAGTAACCTCCTCGTCACCATCAAGGTTGACGGCAGGGTCCGTTGGAAGGTTGGCGCCTTTATCTCCGGCCGTTACCATCTCCACGTCCGTTGCCTCGCTTACATCTCCTTGGGTCCCAACAGTAACGGAATCGCCGTCGGGGAAAACGCTGTTAAGTATCAATTGATCCAACGATGCTCCGTTAGCGTTTGA 630 0.5032 MSVKECEHHRGWKRRIFRRIFWTIIVILFIILVTILLIWAILKPSKPSFILQDVTVYAFNATVPNFLTSNFQVTLVSRNPNDHIGIYYDRLDTYVNYRSQQITYRTGIPPSYQGHKESNVWSPFVYGTNVPVAPFIFAGLAQDQSNSNLLVTIKVDGRVRWKVGAFISGRYHLHVRCLAYISLGPNSNGIAVGENAVKYQLIQRCSVSV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00802 209 Pfam Late embryogenesis abundant protein 77 177 IPR004864 -
Rops6g00802 209 PANTHER OS05G0367900 PROTEIN 19 206 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00802 Rops-Chr6 20633745 20634374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00802 - - gmx:100788592 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00802 6 20633745 20634374 Rops6g00802 6 20633745 20634374 ECH
Rops8g03546 8 75304571 75305596 Rops6g00802 6 20633745 20634374 PCT