Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03519 ATGGCTTGCAATTGCGGCAAAGCCAATAAAACCACCACCGTCGATTCAGGAGGTGTCACCACAATCTCCACCATCCATCCAGACATAATCTTAACCCACATCCTCACGTGTCTCGACGGTCCCTCACTCTCCTCCGCCGCCAGCACGTGCTCTCAACTCAAATCCCTCTCATCGCGCGAGCATCTCTGGTCCAACATTTGCCACTCCACGTGGCCCTCCACTAACACGCCATGCGTCCGCCACGTCATATCTACTTTCCCTCAAGCCTCTCGCTCTTTCTTCTCCGATTCTTTCCCCGTGGTAACTGCCGCCGTTGCTCAGAGCTCTCACCACGGGAATCCAGACCGTACGCCGGAACTGATCTCCGCCGTCGACCTGTTACACGACGGGAAACTCATCCTCTCCAGAGTTGTGGAGACCGAGACGGAATCCGGTTGGTTCCGGTGCTCGCCATTTCGGGTTGACCTTCTCGACGCGAAAGATTCGGTTGAAACGGGTATGGAGTATCCGAAAAACGATGAAGCGTGTATGGATCTTGGGGAAGAGTTGAGGCTGAGTTGGATTGTGATAGACCCTAAGGGGAGGCGTGCGGTGAACGTGTCTAGCTTAAACGTGGTGTCGGTGAAGCGGCACTGGCTGAGCGGTGAGGTGCAGGTGCTGTTCGCGACGGTGGTTGGCGGCGGAGAGAGGGGGTCAGGGAAGGAGGTAGTGTTGTGCAGTTTGATGGTGACGTTTGGGAAGGAAATGATGCAGGTGAGGGAAGCGAGTTTTCAGATGGAGGACATGGATGGGATGCACCTGAATGGTAGGGACAGTTTGGGAATTTTGCAGAGGGCATTGGAGGGTAAAAGAGGAAGAATGAGGAAAGAAAATGAAGGTAAGAATGGATACATGGAGTTCTTGAAAAGTAAAGAGGAGAGGAAAGAGAGGAAGGTCAGGACGGAGAGAAGGTTGGATATTCTCTGCTTGACCTTCGCTGTTTTGTCTTTTTCCGCTCTATTCACTCTCTTTCTCTGCTGA 1020 0.5294 MACNCGKANKTTTVDSGGVTTISTIHPDIILTHILTCLDGPSLSSAASTCSQLKSLSSREHLWSNICHSTWPSTNTPCVRHVISTFPQASRSFFSDSFPVVTAAVAQSSHHGNPDRTPELISAVDLLHDGKLILSRVVETETESGWFRCSPFRVDLLDAKDSVETGMEYPKNDEACMDLGEELRLSWIVIDPKGRRAVNVSSLNVVSVKRHWLSGEVQVLFATVVGGGERGSGKEVVLCSLMVTFGKEMMQVREASFQMEDMDGMHLNGRDSLGILQRALEGKRGRMRKENEGKNGYMEFLKSKEERKERKVRTERRLDILCLTFAVLSFSALFTLFLC* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03519 339 SUPERFAMILY F-box domain 27 88 IPR036047 GO:0005515
Rops8g03519 339 PANTHER F-BOX PROTEIN-RELATED 15 334 IPR045283 -
Rops8g03519 339 Gene3D - 18 97 - -
Rops8g03519 339 Pfam F-box-like 27 67 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03519 Rops-Chr8 74825762 74826935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03519 - - gmx:100801673 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03519 8 74825762 74826935 Rops8g03519 8 74825762 74826935 ECH
Rops6g02066 6 38780795 38782595 Rops8g03519 8 74825762 74826935 PCT