Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03433 ATGGAGATTGGAGAAACGCACAGAAAGAAGCTTCAAGTACAGGTTCCTTGGATCCCCACCACCCCTTATAAGCCCATTCTTCCAAGACCAGTGCCGATCTGCACACCTGGGGAGGAAAACCAGCTGGGTTCTCATTTCAATGGGGTATTTGCATGTTTTGGACCCTCAGCTGGTGCAGAGATAAACAGAAGTCCTCACCGTGAGTCAGCACCTGCTGCTGCAGTCACAGACATTGCCCGTGACAATGCCAAAACTCGCGTGCCGATATCCTTTGACAACATTTCCAGCTCAAGAAATGGCATTGCTGAAATTTTTGCTCAGGCAGATTCTCCGTCGGCATATTATAATGCAACACATGATGGATTTTTGAAGAACCAATTTGTTCCTACTTTGAACTCACAGTTCAACCAGACCTATACATTACTTAACCACTGTCATCTGGCTCGTGAGCAACCCTTGATCAATACTACCCATGACAATTACCAAGATCCTCAGGGCACACCATACTTGGCTTACTACGGCAAGACCACTTCTCAAGTTGCCCCACCTACTCCAGATAATGCCATCGCAGCAGAAAACACACAAGTTGTGATGACACAAATGAATATGGAAGAAAGGGATCAAGGGGGAGAAGAGGAAAATATCCCAGCCACAAAGTGCAACAATCCACACAACCAACTTTCTGACCCTGTTATAGAATTTGCTGCTGTTTCTACACCATGCAAGGAGAATCACAACTACAATAAGGAAATAAGTCATGATCTGGATCTGAATAAAACACCTCAACAAAAACCGAAAAGAAGAAAGCACCGTCCCAAGGTCATAACTGAAGGCAAACCCAAAAGAACAAGGAAGCCAGTCACCCCAAAGCCTGTTCAATCAGAAGAAAACCCAACAGGCAAGAGGAAGTATTCGAGAAGGAAAGGATTGAACATGACTACTCCTCAAACAGAAGTGAGAGGGGAATGGACTAAACCACTGATGCCTGAATCTACCAAAAAGACATGTAGAAGGTCCTTAAATTTTGACAAAGGAGAACCAGGAGATGGAAATTTTGCATGCAGGGAAAATGCAATTACACAATTTGGCAGAGAAATTGGCGTGGAGGTCGAGGAAACACATGGTTTAAATAATTACATGCCATTACAAGATACACAAGCCCCCAGTACCGCTCTTTCAAAAAGCAATTCCTCTGGAGCCAAGCCAAATGCCAGCCATGTGGAGAATGGCAGCAAAAGGGGTTGGATGATTGATCAGGATGGACATGAAAATATACTATCAAAATTAGTAGCACAATCAAGACCAAATGACTCCAACAGCAGCAACAGTGAAATTTTGACCACAGGATTACAGGCAGTTGGTTCCAAGAGAAAACACGGTAACCCTGAACATGCAGATAACAGTGGCAATGGCATTCATCTGATTGGGACACGATACAATGTACTGCAGGCATACCCCCCTAAGTATTGTGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGAAAAAAATCGAACACATTCGATACACCTTCCATGACAGCCACAAAAGATGTACAACTAGCAACATGCCCTCAAGAAGATGCTAGATCACATCCTTATGCATCAAGTTCTAACTGCTGGACTTATGGTCCTGAATATAACAAAGAAGTCCCAGCCATACTTCCAGCTACAGAAAGAGCTATTTATGATAGACCTCAAACATTTGAGTGCAACTTATCTCTAGGACAGAGGGGGCCAACAAAAAGAAGATCAAGAGTCCCTACCAAAATCCATGATTGCACTTCACTGACCTTCATCAGAAATTGTGCTACCAAACTCACTCATACCACAAAACTAGGCAGTTCTGATAGACAAACAGTTGGGGATGCAGAAAGGCCACAGACATGCATTGATTCTTTAGTTGCAAAGATGTGTGCATCACTCACAAAAAAGAAACGGACTAAAAAGAGAAGTACTCTAGCTAGTTCAGCATATTCTTGCACCAATGAAATGCAACAGTACCATAAATTTGTGGTGAAAAATCACAGCCTGCCCATGCATAACTCATTAGATGTTGCTTTTGAAGAGATATGGAGAAACATGCATACTGTGGAGACATTATCAGAGCGATTTAGACACCTGAGCATATATGGAGAAGCTAGAGAGCTAGTGCTGTATAAGCAGAATGCTCTTGTCCCCTATAACCAGCAAAATGAAAAATACAAAGGTCGTGTCCATGAATATGGCACCATCATTCCCTTCGAGGGCTCATTTGATCCCATCAAAAAACACCGCCCACGACCTAAAGTTGACCTTGATGGGGAGACTAATAGAGTGTGGAAGCTTCTGATGTTGGACATAAACAGTCATGGTATTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAGAAGAACGAAATGTGTTTCGGGGACGAGCAGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGCTTTTCTCAATGGAAGGGATCAGTTGTGGATTCAGTAATTGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCCCTGAAGTCAAGCAGCAAGTACGAAACGCACCATGAGGAAAGCACAAGCTTGACAGTCAACAAACCACAAGTGCAAATTGTGGAACCAGAAGAAAATGAAAAACTGGGCGAAAAAATATTTAATCAATCTGTTTATGAATTGAGTTCTATGACAATAGACATCATTGAGCATTCTGAAGAAAGAGAAGCTGTCAACAGCAATGATTCCTGCAGAACTACCAGCAGCTCAATTAGCTTAACAGATGAATCAAATTGCAAACTGTTGGAATCAGCTCAAAGACATATTGGAGAATATAGTCCAACGGAGAGTGTTAGTGCCATGACTGGGGAAGAGAAAGAAAATTCATGCCATGGGGGTGTTAGGAAAGAGTTAAATGATTTATTTTCATCCCCATGCTCTATGATTACATCTCAAATATCTGGAGATTTTCCAATTGATCAAAATCCTGAGAAGATAGGATCATTATCAGATAGTAACTCAGAAGTAGAAGACCTGTCAAGCACAGCCAAATACAACATTTTTAATAACAAAACCTCTTTCACTAAGCTTCTAGAAATGGCAAGTTCAACCATGTTACATGAAGTTAACAGGCAAGGCAGCAAATCAACTGAGAACTTAAGAGATGCATATGGTCAATCAGTAGTCATGAAGGATGACAACAAGGCAGAAAATTTGGAAAAATCAAATATTACTCGAGGCTCCTTAGAAGCATCCACCATATCACGCAATGAATTTACTTTGACAATGACCCCCAACTCAGGAGCACTTGAAGTTAACTGCTATGATCCTCTCAAAATTGAAGCCTCATCAAGTGGCTCCTCAAAGAATAAAGATGGAAATGACAAGATATCTAGTTTTCCAACAACAGAGTCTGAAAGCCAAGCTGCAATTGCCCGTTCTCAGAGTATGCTATCTCAACTCCATCTTCAGCAACAAAGAGATAACAAGCAGCACAACAATTTCCACATTTCAGGACAAACTCAAGATCTCATGCAGAAATCAAGGGAATTAGATTTTCATGACCACAACTATGCCATGAGGAATGAAAACAGCAAGATAGATTCTGCCCCTGTAAAATTAAGGGGCAAGGAGCGTGGAAAAGAGAAAAAGGATAATTTTGATTGGGATAGTTTAAGAATACAAGCACAAGCTAAGGCAGGGAAAAGAGAAAAGACAGAAAACACCATGGACACTTTGGACTGGGATGCTGTGAGACGTGCAGATGTCAATGAAATTGCTGATGCAATCAGAGAAAGGGGCATGAACAATATGCTTGCTGAACGTATTAAGAATTTCCTGAATCTACTGGTTGGCGTACACGGGGCCATTGATCTTGAGTGGCTGAGAGATGTTCCACCTGACCGAGCAAAAGAATACTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGTGTGCGACTCTTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGACGTATAGCAGTACGATTGGGATGGGTACCTCTCCAGCCACTGCCCGAGTCACTACAATTGCATCTTCTAGAATTGTACCCAGTGTTGGAATCCATACAAAAATATCTCTGGCCCCGGCTGTGCAAGCTAGACCAAAGAACATTGTACGAGCTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGGGAATGTAGACATTTTGCAAGTGCTTTTGCAAGTGCAAGGCTTGCCCTGCCAGGACCAGAGCAGAAGAGTATAGTTATAACAACTGGAAACATTGCAACTGATCAGAACCCATCAATAATCATCAATCAGTTGCCCTTGCCTCTCCCTGAAAATACAAACCAAGCAGAAGAACTTCAAAAAACAGAAGTGATCAGGCAATTTGAAGCAAAATCTGAAATTAATATCTGCCAACCTATTATTGAAGAGCCAGCAACTCCAGAGCCAGAATGCTCCCAAGTATCAGAAAATGATATAGAGGATGCCTTCTATGAGGAATCGTGTGAAATTCCCACCATCAAACTAGACATAGAAGAGTTCACTATGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTACATCCAGAAGCTGCTTGCATTCCTACACCCAAGCTGAAGAATGTCAGTCGATTGCGGACAGAGCATTCTGTTTATGAACTCCCAGATTCACATCGTCTCTTGGAAGGGTGGGACAAACGAGAACCTGATGACCCTGGCAAATACCTTCTAGCTATATGGACTCCAGGTGAGACGGCAAATTCCATCCAGCCACCGGAAAGAAAATGCAGTTCTCAGGACAGTGGCCAGCTCTGTAATGAGAAGGAATGTTTTTCGTGCAACAGTTTTCGTGAAGCAAATTCACAAATAGTTCGAGGGACAATCCTGATACCATGTCGGACAGCTATGAGAGGGAGCTTTCCACTAAATGGTACCTATTTTCAAGTCAATGAGGTCTTCGCGGACCATGACTCAAGTCTTAACCCAATTAGCGTTCCCCGAAGTTGGATCTGGAACCTTAATAGGAGAACAGTATATTTTGGAACCTCCATACCAAGCATATTTAAAGGTTTATCAACACAAGAAATTCAACAATGCTTTTGGAGGGGGTACGTCTGTGTGCGGGGATTTGACAGGGAAACAAGAGCACCCCGTCCTCTGAAGGCAAGACTACATTTCCCAGCTAGCAGGTTGACCAAGAACAAGGACAAGACCAGAAAAGAGTCTAAGTCGGCAAACTCACAAGGATTGAATTTGCAACCAAATCCAGAACAGCCAGAATTGCTTTCCAACATTCCCAACCTTTAG 5457 0.4239 MEIGETHRKKLQVQVPWIPTTPYKPILPRPVPICTPGEENQLGSHFNGVFACFGPSAGAEINRSPHRESAPAAAVTDIARDNAKTRVPISFDNISSSRNGIAEIFAQADSPSAYYNATHDGFLKNQFVPTLNSQFNQTYTLLNHCHLAREQPLINTTHDNYQDPQGTPYLAYYGKTTSQVAPPTPDNAIAAENTQVVMTQMNMEERDQGGEEENIPATKCNNPHNQLSDPVIEFAAVSTPCKENHNYNKEISHDLDLNKTPQQKPKRRKHRPKVITEGKPKRTRKPVTPKPVQSEENPTGKRKYSRRKGLNMTTPQTEVRGEWTKPLMPESTKKTCRRSLNFDKGEPGDGNFACRENAITQFGREIGVEVEETHGLNNYMPLQDTQAPSTALSKSNSSGAKPNASHVENGSKRGWMIDQDGHENILSKLVAQSRPNDSNSSNSEILTTGLQAVGSKRKHGNPEHADNSGNGIHLIGTRYNVLQAYPPKYCVQFPNVQKKRRSEKGKKSNTFDTPSMTATKDVQLATCPQEDARSHPYASSSNCWTYGPEYNKEVPAILPATERAIYDRPQTFECNLSLGQRGPTKRRSRVPTKIHDCTSLTFIRNCATKLTHTTKLGSSDRQTVGDAERPQTCIDSLVAKMCASLTKKKRTKKRSTLASSAYSCTNEMQQYHKFVVKNHSLPMHNSLDVAFEEIWRNMHTVETLSERFRHLSIYGEARELVLYKQNALVPYNQQNEKYKGRVHEYGTIIPFEGSFDPIKKHRPRPKVDLDGETNRVWKLLMLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSQWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLKSSSKYETHHEESTSLTVNKPQVQIVEPEENEKLGEKIFNQSVYELSSMTIDIIEHSEEREAVNSNDSCRTTSSSISLTDESNCKLLESAQRHIGEYSPTESVSAMTGEEKENSCHGGVRKELNDLFSSPCSMITSQISGDFPIDQNPEKIGSLSDSNSEVEDLSSTAKYNIFNNKTSFTKLLEMASSTMLHEVNRQGSKSTENLRDAYGQSVVMKDDNKAENLEKSNITRGSLEASTISRNEFTLTMTPNSGALEVNCYDPLKIEASSSGSSKNKDGNDKISSFPTTESESQAAIARSQSMLSQLHLQQQRDNKQHNNFHISGQTQDLMQKSRELDFHDHNYAMRNENSKIDSAPVKLRGKERGKEKKDNFDWDSLRIQAQAKAGKREKTENTMDTLDWDAVRRADVNEIADAIRERGMNNMLAERIKNFLNLLVGVHGAIDLEWLRDVPPDRAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKSIVITTGNIATDQNPSIIINQLPLPLPENTNQAEELQKTEVIRQFEAKSEINICQPIIEEPATPEPECSQVSENDIEDAFYEESCEIPTIKLDIEEFTMNLQNYMQENMELQEGEMSKALVALHPEAACIPTPKLKNVSRLRTEHSVYELPDSHRLLEGWDKREPDDPGKYLLAIWTPGETANSIQPPERKCSSQDSGQLCNEKECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSIPSIFKGLSTQEIQQCFWRGYVCVRGFDRETRAPRPLKARLHFPASRLTKNKDKTRKESKSANSQGLNLQPNPEQPELLSNIPNL* 1819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03433 1818 MobiDBLite consensus disorder prediction 1779 1793 - -
Rops8g03433 1818 FunFam DNA glycosylase/AP lyase ROS1 1338 1446 - -
Rops8g03433 1818 Coils Coil 1778 1798 - -
Rops8g03433 1818 Gene3D - 1346 1434 IPR023170 -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 381 416 - -
Rops8g03433 1818 Pfam Permuted single zf-CXXC unit 1642 1673 IPR028924 -
Rops8g03433 1818 Coils Coil 1548 1568 - -
Rops8g03433 1818 Gene3D Hypothetical protein; domain 2 1247 1345 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 263 278 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 497 517 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 1132 1180 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 381 405 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 248 306 - -
Rops8g03433 1818 CDD ENDO3c 1264 1382 IPR003265 GO:0006284
Rops8g03433 1818 MobiDBLite consensus disorder prediction 248 262 - -
Rops8g03433 1818 MobiDBLite consensus disorder prediction 1771 1818 - -
Rops8g03433 1818 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 174 1787 IPR044811 GO:0019104|GO:0035514|GO:0080111
Rops8g03433 1818 SMART endo3end 1244 1416 IPR003265 GO:0006284
Rops8g03433 1818 MobiDBLite consensus disorder prediction 1794 1818 - -
Rops8g03433 1818 SUPERFAMILY DNA-glycosylase 809 1439 IPR011257 GO:0003824|GO:0006281
Rops8g03433 1818 SMART ccc3 1417 1437 IPR003651 GO:0051539
Rops8g03433 1818 Pfam RRM in Demeter 1676 1776 IPR028925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03433 Rops-Chr8 73510297 73521358 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03433 - - gmx:100787368 2470.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03433 8 73510297 73521358 Rops8g03433 8 73510297 73521358 ECH
Rops8g03433 8 73510297 73521358 Rops6g00918 6 22469440 22481473 PCT