Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00918 ATGGTGGTTGGGGAAATGGAGAATAAGGAACCAGAAGTGGAGGTTCCTTGGATCCCCACCACCCCTGTTAAGCCTGTTCTTCCAAAACCAGTTCCGATCTGCACTCCGGGGGAGGGAATCCACATGGGTCATCATGCTAATGAAGCAGTTGCATGTTTTGAATTCTCACCTGGTTCTGAGAAAAACAGCCGACCCAATGATGGGTCAGTACCTGAAGCTACAGTGACAGACATTGCCGATAACGATGGCAAAACTTGTGAACAGACAGCTTCTGATAATGTTTCCGGCTGGGGTAATCTCAGCTCTTCCGAAATCTTGTTCCCTGCAGAAGCAGAATCAGCAAGTTCTTATGCAACACAACCAGACAATAATGATGGATTGAAGAATCCATTTATTCCTTCAATAATTCATGACAATTCCCAGGATCCTCAGGAAATATTGGACAATGCTTGCTGTACCAAGAGAACTTCCCAAGATACCCCAGTTACCCCAGACAATGCCATCAGAGCAGAAAGTAGACAACTTGCATCAATGCAAATCAATATGGAAGAAAAGGATCCAGGAGGGGAAGAGAAGAATGTCCCTGCTAAAATGATTGACGATAATGGAACCCCATCCAACAAAGAACTCTGTGACACTGTCATAGAATTTGCTGCTGTTTCATCACCGTTCGAGGAGAATCACAACCCAGATAAGGGAAGCAGCCCTGATACAGATCTGAATAAAACACAACAAAAACCAAAGAGAAGAAAGCACCGCCCCAAGGTTGTCAGTGAAGGCAAACCCAAAAGAACTCGGAAACCAGTTACCCCAAAGCCTGTTCAATCAGAAGAAAACCCAACTGGCAAGAGGAAGTATGTGAGAAGACAAGGATTGAACAAAACTTCTACCCCTCCAACAGAAGTGATGGGAGAATCCACTAAAGAAATGCCTGAATCTGTCAAAATGTCTTGCAGAAGGTCCTTGAATTTTGACATAGAAGCAAGTGAAGAAAGTTCCACAGGCAGAGAAAATGCAAGTGCACTTTTGGGCAAACAAAATAGTGTAGTTGTACAGGAAACAAATGCAGGCCTTGCCTGTGATTTGAACACTTCAATTATGCAGGCATCAAACAGTTACATGTCATTGCCAGAAGAGACACAAGCCCCAAATAAATCTCCTTCACGAAAAACCTGCCCTGGGGCAAAGCCTAAAGAAAACCCAAGTGGCAAGAGGAAGTCTGTGAGAAAGAAAGGATTGAACAAGACTTCTGCTCCTCCAACAGAAGTGACAGGAAAATTGACTACAGAAATGATGCTGGAATCTGCCAAAACACCATGCAAAAGGTCCACTAGTTTTGAAAAAGGAGCAAGGGAAAAAAGTTCTGCAGTCAAAGAAAATGCAACTGTGCATCTGGGCAAAGAAATTGGTGTAGTCACACAGGAAGTGAATGCCCTTGCCTATGATGTAAACACTTCCATGAAGCAGGAATCAAACAGTTACGTGTCATTAACAGAAGACACACAAGCCACAAATACATCTCCTTCAAGAAGAAACCCCCCTGGGGCAAAGCCAAAAGAAAACCCAACTGCCAAGAGGAAGTATGTGACAAGGTCAAGATCGAACAAGTCTTCCACTCCCAATGAAGTGACAGGAGAATTGACTAAAGAAATGCCCGAATCTACCAAAACTTCTTGTAGAATGTCATTAAATTTTGACAAAGGAGCAAGAGATGAAAGTTCTGTAGACAAAGAAAATGCAGCTGTGCATCTGGGCAAAGACATTGGTGTAGTCACGCAGGAAATGAATGTAGGCCTTGCCTATGATCTAAATACTTCCACAAAGCAGGCATCAAATAATACCATGTCATTGCCTAATGAACAAGCCCCAAGTACATCCCCTTCAACAAGCAAGCCCCCAGGGGCAAAGCCAAAAGAAAACCCAACTGGCAAGAGGAAGTATGTAAAAAGAATTGGTTCGAATAAGTCTCCGACTACTCCAACAGAAATGGCAGGAGAATTGACTGAAGCAATGATGCCAGAATCTAAAAAACTGTCATGGAGAAGGTCCTTAAATTTTGACATAGGAACAAGAGATGAAAGTTCTGCAGGCAGAGAAATTTTGAGTGTGCATGTGGGCGAGGAAAATAATGGGGTGGTTGAGGAAACACCCGTAGGCCTTGCCTATAGTCCAGACACTTGGATGAAGCAGGCATTAAATAATTGCATGTCATTACCTGAAGACACACAAACTGCAAGTACATCTTTGAAATGCAATCCCCCTGGAGGAAAGCCAAAAGAAAACCCAACTGGCAAGAGGAAGCGTGTGAGAAGGAAAGGATTGAACAACACTCCTACTCTGACAGAATTGACTGAACCAATCATGCCTGAGTCTACCATAATATCATGTAGAAGGTCCTTAAACTTTGACAAAGGAGCAAGAAATGAAAGTAATACATGCAGAGATAGCCATGCCAGTGATCAAAACACTGGTGTGGAAGAATCATTATATAATTACATGTCATTACCTGAAAACACACAATCCCCAAGTATATCTCTTTCAAAAAGCAACCCCACTGGGGCAAAGCTGAATTCCAACTCTAAAAACAAAAGAAAGGGCCCAGCAAATGCTCAGGATGGAATCGGTAACAGTCAAATTTCAACAATAAGTTTACATTCCAAGAGAAAACATTCTGGTACCATTAAATGTGCAGACAACAGCAGCATGAACCTGATTGGGGCACACTATAACGGATTGCCCTCTTACCAGACAAAGTTTTGGGTTCAGTTTCCAAATATTCAGAAGAAAAGGAGAACTGGGAAAACTTCTAACACTCATATTACATCTTCTGTGACTACTGAAAAAGAAGTACAACTAACATGCCCTCAAGAAGATGCTCAAGCACATCTTTTGGCATCAAACTCCAACTGCTGGATTTATGGTCCTGTATATAATGCAGCTATACTCCCAGCCATAAGTGAATCAACAGAAAATGTTACTGATACTACTCAAACATTTGAGGATTTCATCTTATCTTTGAGAAGGCTGACAGATAGATCTCGATCCCCTCCTCAAACTTGTGATTGTGGTTCTCTAACCAGAATTGGAAACTGTGATGCCGGACCAAATTATACTGCAAAACAACTAGGCATTTCAGACAGGCAAATATTTGGGGCTGCAGAAAGATCACAAACATGCATTGATGCCTTAGTTGCAGAGCCACGTGTATCACTCACAAAAAAGAAGCGAAATAGAAAGAGAAGTGCTCTTTCCAGTTCAGCATATTTTAGCACTAATGAGATGCAACAGCACAATAATTTTGCGCTGAGAAATCACCACCTGACATTGGGGAAGTCATTAGATAATGCTCCTGTAGTATGGTTTTATGTTGAAGCATTAGCAGAGCAATTTAGACAGCTAAACATAAACACAGAAGCCAGAGACCTTCCCTTACATGAGCAGAATGCACTTGTTCTCTTTCAGGGCCCATTTGATCCCATCAAAAAACAGCGTCCACGACCTAAAGTTGACCTTGATGAGGAGACTGATAGAGTATGGAAGCTTTTGATGTTAGATATAAACAGTCATGGGATTGATGGAACAGATGAAAACAAGGCCAAATGGTGGGAAGAAGAACGAAATGTATTCCGTGGAAGAGCCAACTCATTTATTGCGCGGATGCATCTTGTACAAGGAGACAGACGATTTTCTCCATGGAAAGGATCAGTTGTGGATTCAGTGGTAGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTATCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCTCGAAAGTCAAGCAGCATGTGTAAAACATTCCATGACGAAGGCACAAGCCTGGTAGTCAACAAACCACAAGTGCATGTAGTGGAACCAGAAGAGAACACAGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGAGTTCTATGACAATAGATATAGTTGAGCATTCCAGAGAAAAAGAAGCTGTCAACAGCAATGATTCCTGCAGAATTACCGATGGGGTTATTAGCTCAACAGTTGAACCAAACTGCAGACTGTCAGAATCATCTCAAAGAAATATTAAGGAACACCATGGTCCAATGAGGAGTGAACTAATTAGTGCTATGATTGAGGAAGGGGAAGAAAAATCATGTTACGATGGTGGGAAAGAGTTAAATGACATAGTTTCATCCCAATGCTCTGTTGTTTCATCTCAAATATCCGGAGATTTTTCAAATGATCAAAATCCTGAGAAGATAGGATCATACTCAGATAGCAACTCAGAAGTAGAAGATCTGTCAAGCACAGCAAAGTACAACATTCATAATAGCAGCACTTCCTTCAGTAAGCTTCTAGAAATGGTTAGTTCAACCAAGTTTCATGAAGTTAACAGTCAAAGAAGCAAATCTACTGAGAACTTAAGAGATGCATATGGCCAATCTATAGGCATGAAGCATGACAACCCTCCAGAAAGCTTGAAAAAATCAAATGTTACTCAAGGCTCTTTAGAAGAATCTATCATCCCGTCCCATGAATATGGTTTGAAACTCACCCACAACTCTGGAGTGCTTGAAGTTAACTTCTCTGATCCTTTCAAAACAGAAGCCTCATCAAATGGCTTCTTAAAGAATAAAGATGAGAATGACATGAACAGACCTAGTTTTCAAACAGCAGAGTCTGCAGGCCAAGTTGCAATTACTCATTCTCAAAGCATTGCATCTCAAGTCCATCCTCAGGATCAAGGCAATCAAATGCAGCAAAGCTTTTTCAACATTTCAGGACAAACTCAAGATCTTATGCAGAAAGAAAGGGGGTTAGATCTCGGTGACCACAAAGATGCTGTGAGGAGTGAAACCAATGAGATAAGTTCTGCCCCAATAAAATTAAAGAGCAGGGGACAAGGAAAGGAGAAAAAGGATGATATTAACTGGGATAATTTAAGAATAAAAGCACAAGCTAAGGCTGGGAAAAGGGAAAAGACAGCAAACACCATGGATTCTTTGGACTGGGATGCTGTGAGACGTGCAGATGTCAGTGAAGTTGCTAATGCCATCAAAGAAAGGGGCATGAACAACAGGCTTGCAGAACGTATTAAGAATTTCCTGGATCGACTGGTTGAAGAACATGGAGGCATTGACCTCGAGTGGCTGAGAGACGTTCCACCTGACCAAGCAAAAGAATACTTGCTCAGCGTAAGAGGACTGGGATTGAAAAGTGTGGAGTGTGTGCGGCTTTTAACGCTGCACCATCTTGCCTTCCCAGTGGACACAAATGTTGGACGTATAGCAGTACGACTGGGATGGGTACCTCTCCAGCCACTGCCTGAGTCACTACAGTTGCATCTCCTAGAATTGTACCCAGTGTTGGAGTCCATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGACCAAAGAACATTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCCCTGCCTGGACCAGAACAGAGGAGTATAGTTAGCACAGCTGGAAATAGTGTGAATAATCAGAACCCATCTGTAATCATCCCTCAGTTGCAATTGCCTCTCCCTGGGAACACAAACCAAGGAGAAGAAATTCAACAAACAGAAGTGGGCAGGCAACTGGAATCAAAATCTGAAATAAATATCTGCCAGCCTATCATTGAAGAGCCAACAACTCCAGAGCCAGAATGCTCACAAGTATCACAAAATGATATGGAGGATGCCTTCTATGAGGATTCGTGTGAAATTCCTACCATCAAACTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTTTGAATCCAGAAGCTGCCTCCATTCCCATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCATTGCGTTTATGAACTCCCAGATAAGCATCCTCTTCTGGAAGGGTGGGACACACGAGAGCCTGATGACCCGGGCAAATACCTTCTTGCTATATGGACCCCAGGTGAGACAGCAAATTCAATACAACCACCTGAAAGCAAATGCAGCTCTCAAGACGAATGTGGCCAACTCTGCAATGAGAAGGAATGCTTCTCATGCAACAGTTTCCGTGAAGCAAATTCACAGATAGTTAGAGGGACAATCCTGATACCATGTCGAACAGCTATGCGGGGGAGCTTTCCACTAAATGGCACTTATTTCCAAGTCAATGAGGTATTTGCGGACCATGACTCAAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTCAATAGGCGAACAGTATATTTTGGAACCTCCATACCAACAATATTTAAAGGTTTATCAACACCAGAAATTCAACAATGCTTTTGGAGAGGGTATCTCTGTGTGCGGGGGTTTGACAGGGAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACACTTCCCAGCTAGCAAATTGCCCAAGACCAAAGAGAAGACAAGAAAAGAGTCAAGTTCGGCGAACTCAAAGGGACAGAAACCAAATCCAGAACACCCGGAATTGATTTCTAACAGTAACAACCTTCAGGAGAGGGGAACAGCCTGA 6687 0.4237 MVVGEMENKEPEVEVPWIPTTPVKPVLPKPVPICTPGEGIHMGHHANEAVACFEFSPGSEKNSRPNDGSVPEATVTDIADNDGKTCEQTASDNVSGWGNLSSSEILFPAEAESASSYATQPDNNDGLKNPFIPSIIHDNSQDPQEILDNACCTKRTSQDTPVTPDNAIRAESRQLASMQINMEEKDPGGEEKNVPAKMIDDNGTPSNKELCDTVIEFAAVSSPFEENHNPDKGSSPDTDLNKTQQKPKRRKHRPKVVSEGKPKRTRKPVTPKPVQSEENPTGKRKYVRRQGLNKTSTPPTEVMGESTKEMPESVKMSCRRSLNFDIEASEESSTGRENASALLGKQNSVVVQETNAGLACDLNTSIMQASNSYMSLPEETQAPNKSPSRKTCPGAKPKENPSGKRKSVRKKGLNKTSAPPTEVTGKLTTEMMLESAKTPCKRSTSFEKGAREKSSAVKENATVHLGKEIGVVTQEVNALAYDVNTSMKQESNSYVSLTEDTQATNTSPSRRNPPGAKPKENPTAKRKYVTRSRSNKSSTPNEVTGELTKEMPESTKTSCRMSLNFDKGARDESSVDKENAAVHLGKDIGVVTQEMNVGLAYDLNTSTKQASNNTMSLPNEQAPSTSPSTSKPPGAKPKENPTGKRKYVKRIGSNKSPTTPTEMAGELTEAMMPESKKLSWRRSLNFDIGTRDESSAGREILSVHVGEENNGVVEETPVGLAYSPDTWMKQALNNCMSLPEDTQTASTSLKCNPPGGKPKENPTGKRKRVRRKGLNNTPTLTELTEPIMPESTIISCRRSLNFDKGARNESNTCRDSHASDQNTGVEESLYNYMSLPENTQSPSISLSKSNPTGAKLNSNSKNKRKGPANAQDGIGNSQISTISLHSKRKHSGTIKCADNSSMNLIGAHYNGLPSYQTKFWVQFPNIQKKRRTGKTSNTHITSSVTTEKEVQLTCPQEDAQAHLLASNSNCWIYGPVYNAAILPAISESTENVTDTTQTFEDFILSLRRLTDRSRSPPQTCDCGSLTRIGNCDAGPNYTAKQLGISDRQIFGAAERSQTCIDALVAEPRVSLTKKKRNRKRSALSSSAYFSTNEMQQHNNFALRNHHLTLGKSLDNAPVVWFYVEALAEQFRQLNINTEARDLPLHEQNALVLFQGPFDPIKKQRPRPKVDLDEETDRVWKLLMLDINSHGIDGTDENKAKWWEEERNVFRGRANSFIARMHLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPRKSSSMCKTFHDEGTSLVVNKPQVHVVEPEENTEWDVKLLNQSVYDQSSMTIDIVEHSREKEAVNSNDSCRITDGVISSTVEPNCRLSESSQRNIKEHHGPMRSELISAMIEEGEEKSCYDGGKELNDIVSSQCSVVSSQISGDFSNDQNPEKIGSYSDSNSEVEDLSSTAKYNIHNSSTSFSKLLEMVSSTKFHEVNSQRSKSTENLRDAYGQSIGMKHDNPPESLKKSNVTQGSLEESIIPSHEYGLKLTHNSGVLEVNFSDPFKTEASSNGFLKNKDENDMNRPSFQTAESAGQVAITHSQSIASQVHPQDQGNQMQQSFFNISGQTQDLMQKERGLDLGDHKDAVRSETNEISSAPIKLKSRGQGKEKKDDINWDNLRIKAQAKAGKREKTANTMDSLDWDAVRRADVSEVANAIKERGMNNRLAERIKNFLDRLVEEHGGIDLEWLRDVPPDQAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQRSIVSTAGNSVNNQNPSVIIPQLQLPLPGNTNQGEEIQQTEVGRQLESKSEINICQPIIEEPTTPEPECSQVSQNDMEDAFYEDSCEIPTIKLNIEEFTLNLQNYMQENMELQEGEMSKALVALNPEAASIPMPKLKNVSRLRTEHCVYELPDKHPLLEGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSQDECGQLCNEKECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSIPTIFKGLSTPEIQQCFWRGYLCVRGFDRETRAPRPLMARLHFPASKLPKTKEKTRKESSSANSKGQKPNPEHPELISNSNNLQERGTA* 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00918 2228 MobiDBLite consensus disorder prediction 2177 2228 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 835 877 - -
Rops6g00918 2228 Pfam Permuted single zf-CXXC unit 2047 2079 IPR028924 -
Rops6g00918 2228 CDD ENDO3c 1646 1787 IPR003265 GO:0006284
Rops6g00918 2228 Gene3D - 1744 1859 IPR023170 -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 533 558 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 81 99 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 112 127 - -
Rops6g00918 2228 Pfam RRM in Demeter 2082 2182 IPR028925 -
Rops6g00918 2228 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 601 751 IPR044811 GO:0019104|GO:0035514|GO:0080111
Rops6g00918 2228 SMART ccc3 1822 1842 IPR003651 GO:0051539
Rops6g00918 2228 MobiDBLite consensus disorder prediction 488 512 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 2185 2200 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 1407 1428 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 488 558 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 245 260 - -
Rops6g00918 2228 SUPERFAMILY DNA-glycosylase 1212 1844 IPR011257 GO:0003824|GO:0006281
Rops6g00918 2228 MobiDBLite consensus disorder prediction 184 208 - -
Rops6g00918 2228 SMART endo3end 1649 1821 IPR003265 GO:0006284
Rops6g00918 2228 MobiDBLite consensus disorder prediction 222 314 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 609 663 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 56 99 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 1615 1640 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 444 458 - -
Rops6g00918 2228 Coils Coil 1953 1973 - -
Rops6g00918 2228 Gene3D Hypothetical protein; domain 2 1644 1743 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 376 458 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 112 139 - -
Rops6g00918 2228 FunFam DNA glycosylase/AP lyase ROS1 1743 1851 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 609 635 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 740 786 - -
Rops6g00918 2228 MobiDBLite consensus disorder prediction 2201 2228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00918 Rops-Chr6 22469440 22481473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00918 - - aprc:113870890 2874.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00918 6 22469440 22481473 Rops6g00918 6 22469440 22481473 ECH
Rops8g03433 8 73510297 73521358 Rops6g00918 6 22469440 22481473 PCT