Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03377 ATGGAGGAGCACTTTCTTGTGCAGAGAGAAACAATACCTGTTGATGCCATTTCTGAAATAGACCATCTATCTATGTTGACAAATGGTGAAGCTGATCATTCCTCTGAAATTGATGACTTTAGTGTAGGACAACTCTTACTCTCCAATGGAGAATTATATTCTGGTTCCCTTTATGGCAATATTCCTGAGGGCCAGGGTAGGTATGTGTGGTCTGATGGTTGTGTATATGAGGGTGAGTGGAGGAGAGGGATGAGAAATGGGAATGGAAAAATAAGATGGCCTTCTGGAGCAGTGTATGAGGGTGAATTCTCTGGTGGCTATATACATGGTACAGGAACATATATTGGTTCTGATAATTTGACCTATAAAGGTAGGTGGAGATTGAATCTTAAACATGGTCTCGGTTATCAAGTTTGTCCTAATGGAGATATCCTTGAAGGCTCTTGGATACAAGGAACACCAGAAGGGCCTGGAAAGTATACTTGGGACAATGGAAATGTATATGTAGGGAATATGAAAGGTGGGACAATGTCAGGAAAAGGAACTCTTACATGGATAAATGGAGACTCATATGAAGGAAACTGGTTAAATGGCATGATGCATGGGTTTGGAGCATACACTTGGAGTGATGGAGGCTGCTATGTGGGGACTTGGACATATGGTCTAAAAGATGGCAAAGGAACTTTTTATCCAAAAGGAAGTAATCTTCCATCTGTACAAGAAATTTACCTCAATGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAGAAAACAGAATCAAGTTAGAGATATCAAGGTTGGTGAAAACCAGACATCAAGCCGTGTTTCATCAGGTAGAAGAAATGTTTCTCTTGAAAGGCGTTGGAGTCTTGAGGTATCTATTGAGAAAGTCATAGCGCATGATTCCACATTAGGATTAACAGAATCTGTACAAGAAAGCAGTGATAAAGAGGTTAATGCAAACATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGCTAGTGTTAAATAATATGTTTTCATCAATGTCCAGAAGGGCAAGACGACTTCAAAAGAAACTTGTCAAAGAGATTAAAAGACCTGGTGAAGCAATCATCAAAGGTCACAGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATTACGCCTGTACCAAGGCGAGAAGTTCGAGCATCAGATTTTGGTTCCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTCCTCATCAATCAGAGGATTTTAAATGGAAAGATTATTGTCCAATGGTGTTCAGAAATTTAAGAGAGTTGTTCAAGATTGATGCTGCCGACTACATGATATCCATTTGTGGAAGTGATGCTCTGAGGGAACTATCTTCTCCAGGGAAGAGTGGCAGTGTGTTTTTCCTGTCACAGGATGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTCCAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATACGAAAATACACTCATCACAAAAATTTTTGGCCTGCACAGGATTAAGCCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTGATGGGAAATATGTTCTGCACAGAATTAAGGATCCATCGGAGATTTGATTTAAAAGGTTCATCCCTTGGACGATCATCAGATAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTGAACTACTGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTAAAGCAAATTGAAATAGACAGCAAATTTTTGGAAGCACGGCACATTATGGATTACAGCCTTCTTCTTGGTGTTCACTATCGAGCTCCCCAGCATCTGCGTACTCCCAATGGATTAGCAATGCTTGCAGAGGAAGACACTCTGGAGGATGAAGCATCGAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAACAGAGGATGATAGTGTCGTTGTGGGCTCACACATGAGGGGTAGCCGATTGAGAGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGGACAGCAAGATTACAAATCCAGCTTGGTGTAAACATGCCATCAAGGGTAGAGCGGATTCCAGGAAAACAAGAAAAACAAACATTCCATGAGGTGTACGACGTCGTACTGTACATGGGTATCATTGACATATTGCAAGACTACAACATGACTAAGAAGATTGAACATGCCTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGTTGTGGACCCCACATTCTACTCTCGTCGATTCCTGGAATTTATTCAGAAAGTGTTTCCACCAAATGCAACGACAGGTTAA 2370 0.4093 MEEHFLVQRETIPVDAISEIDHLSMLTNGEADHSSEIDDFSVGQLLLSNGELYSGSLYGNIPEGQGRYVWSDGCVYEGEWRRGMRNGNGKIRWPSGAVYEGEFSGGYIHGTGTYIGSDNLTYKGRWRLNLKHGLGYQVCPNGDILEGSWIQGTPEGPGKYTWDNGNVYVGNMKGGTMSGKGTLTWINGDSYEGNWLNGMMHGFGAYTWSDGGCYVGTWTYGLKDGKGTFYPKGSNLPSVQEIYLNALRKRGLLPDLRKQNQVRDIKVGENQTSSRVSSGRRNVSLERRWSLEVSIEKVIAHDSTLGLTESVQESSDKEVNANIPILEREYMQGVLISELVLNNMFSSMSRRARRLQKKLVKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVPRREVRASDFGSKASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMISICGSDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVQVLLRMLPDYHHHVKSYENTLITKIFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEARHIMDYSLLLGVHYRAPQHLRTPNGLAMLAEEDTLEDEASNYPQGLVLVPRGTEDDSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRVERIPGKQEKQTFHEVYDVVLYMGIIDILQDYNMTKKIEHAYKSLQFDSLSISVVDPTFYSRRFLEFIQKVFPPNATTG* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03377 789 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 162 234 - -
Rops8g03377 789 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 62 782 IPR023610 -
Rops8g03377 789 Gene3D - 545 782 - -
Rops8g03377 789 CDD PIPKc_AtPIP5K_like 376 781 - -
Rops8g03377 789 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 362 544 IPR027484 -
Rops8g03377 789 FunFam Phosphatidylinositol 4-phosphate 5-kinase 362 544 - -
Rops8g03377 789 SMART PIPK_2 403 783 IPR002498 GO:0016307|GO:0046488
Rops8g03377 789 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 48 170 - -
Rops8g03377 789 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 373 782 IPR002498 GO:0016307|GO:0046488
Rops8g03377 789 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 462 780 IPR002498 GO:0016307|GO:0046488
Rops8g03377 789 Gene3D - 147 197 - -
Rops8g03377 789 Gene3D - 198 241 - -
Rops8g03377 789 Gene3D - 78 131 - -
Rops8g03377 789 PIRSF PIP5K_plant 3 786 IPR017163 GO:0005524|GO:0016308
Rops8g03377 789 SUPERFAMILY SAICAR synthase-like 372 782 - -
Rops8g03377 789 Pfam MORN repeat 76 97 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 146 167 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 214 234 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 191 212 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 168 189 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 122 143 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 53 75 IPR003409 -
Rops8g03377 789 Pfam MORN repeat 99 119 IPR003409 -
Rops8g03377 789 SMART morn 97 118 IPR003409 -
Rops8g03377 789 SMART morn 120 141 IPR003409 -
Rops8g03377 789 SMART morn 143 164 IPR003409 -
Rops8g03377 789 SMART morn 189 210 IPR003409 -
Rops8g03377 789 SMART morn 166 187 IPR003409 -
Rops8g03377 789 SMART morn 51 72 IPR003409 -
Rops8g03377 789 SMART morn 212 233 IPR003409 -
Rops8g03377 789 SMART morn 74 95 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03377 Rops-Chr8 72661548 72669208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03377 11 785 Acyl Lipid Metabolism Gene Families AT3G09920 72.784 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03377 K00889 - gmx:100800418 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03377 8 72661548 72669208 Rops8g03377 8 72661548 72669208 ECH
Rops8g03377 8 72661548 72669208 Rops6g00974 6 23583561 23590974 PCT