Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00974 ATGTGGATCTCTTCCAGCTTGTGTAATGACAGATTTCTAATTTGGTTTATTTTTCTGACTCCTCTTCTCCAGTCAAAAGGACAAAGTTTCAAGGGTCAATCTCTGGAGAGAACAAAATCCCTTGATGCCATTTCTAAAATAGACAGTATATCTTTATTGACAAACGGTGAAGCTGATCATTCCTCTGATATTGCTGGCTTTAGAGTCGGGGAACTCTTACTTCCTAATGGAGAATCATATTCTGGGTCCCTTATTGGCAACATTCCAGAGGGTCCTGGTAAGTATGTATGGTCAGATGGTTGTGTATATGATGGACAGTGGAGACGGGGGATAAGAACTGGAATTGGAAAAATACAATGGCCTTCTGGAGTAATGTATGAGGGTGAATTCTCTGGTGGCTATATCCATGGTACGGGAACATATATTGGCCCCAATAATCTGACCTACAAAGGTCGGTGGCGATTGAATCTTAAACATGGGCTTGGTTATCAAGTTTATCCCAATGGAGATATCTTTGAAGGCTCTTGGATCCAAGGAACACCGGAGGGGCCAGGAAAGTATACCTGGGCCAATGGAAATGTATATTTGGGGAATATGAAAGGTGGGAAAATGTCAGGAAAAGGAACTCTGACTTGGGTAAATGGAGACTCATTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGCTTGGGGCATATACTTGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGAGGTCTGAAAGATGGCAAAGGAACCTTTTATCCAAAAGGCAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAAAGAGGGCTATTACCAGATTTGAGAAAACAAAACCAGGTGCATATTCATCATGCTGCTTCAGTTGATATCGGAGATGTCAAGGTTGGTGAGAACCAGAGATCAAGTCGTGTTTCATCTGATAAGCTTGCCAAAGGAAACCTGTTAAATCTGGAACAATCTCACAGCAAAAATATTTCTCTTGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGGGATTGGGCATGATTCAAATTTTGGTTCAACAGATTCTGTTCTTGAAAGTGGAGATAAAGAAAATACTGAAAAGATCCCAATTTTGGAACGTGAGTATATGCAAGGTGTATTAATAAGTGAGCTAGTTTTAAATAATAGTTTTTCATCATTGTCTAGAAGAGCAAAACAGCTTCAAAAGAAAATTGCCAAAGAGATTAAAAAACCTGGTGAAACAATCATTAAAGGTCACAGGAGTTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTATACAGTGGGAAAGATCACCCCCATACAGAGACGAGAAGTAAGAGCATCAGATTTTGGTCCTAGAGCAAGCTTTTGGATGAATTTTCCTAAAGATGGCTCTCAATTGACACCTCCTCATCAGTCAGAGGATTTTAAATGGAAAGATTACTGCCCAATGGTGTTCAGAAAATTGAGAGAGTTGTTCAAGATTGACGCTGCTGATTATATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTATCTTCTCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTTCGGAAATCTGAAGTTAAGGTTCTTCTTAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAGAATACACTCATCACAAAATTTTTTGGTCTGCACAGAATTATACCTTCGAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAGGAGATTTGATTTAAAAGGTTCATCCCTTGGACGTTCTTCAGACAAGATAGAAATGGATGAGAATACCACTCTTAAAGATTTGGATCTGAACTACTGCTTTTACTTGGAACCATCTTGGCGGGAATCTTTATTAAAGCAGATTGAGATTGACAGTAAGTTCTTGGAATTACAGCGCATAATGGATTACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCTCAGCAGCTGCGTCTCATGTCCTACAACCAAAGTATAAATGCAGATGGATTGGCAATACTTGCTGAGGAAGACCCTCTAGAGGACGAAGTATCCAACTATCCAGAAGGCCTTGTTCTCGTCCCTCGGGGAGCTGATGATGAGAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCCGATTGCGAGCTTCAGCTGCTGGTGACGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGACTACAAATCCAGCTAGGTGTGAACATGCCAGCAAGAGCAGAGCAGATTCCAGGAAAAGAGGAAATGCAAATGTTCCACGAGACTTATGATGTCGTACTTTACCTGGGTATCATAGATATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCTTATAAATCTCGTCAGTTTGATTCATTATCTATCTCGGCGGTGGACCCAACATTCTACTCACGTCGCTTCCTGGATTTTATTCAGAAAGTGTTCCCACCAAATGCAACTTCAGGATAG 2547 0.4115 MWISSSLCNDRFLIWFIFLTPLLQSKGQSFKGQSLERTKSLDAISKIDSISLLTNGEADHSSDIAGFRVGELLLPNGESYSGSLIGNIPEGPGKYVWSDGCVYDGQWRRGIRTGIGKIQWPSGVMYEGEFSGGYIHGTGTYIGPNNLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGKMSGKGTLTWVNGDSFEGSWLNGMMHGLGAYTWSDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEIYLNALRKRGLLPDLRKQNQVHIHHAASVDIGDVKVGENQRSSRVSSDKLAKGNLLNLEQSHSKNISLERRWSLEVSIEKGIGHDSNFGSTDSVLESGDKENTEKIPILEREYMQGVLISELVLNNSFSSLSRRAKQLQKKIAKEIKKPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKDGSQLTPPHQSEDFKWKDYCPMVFRKLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEMDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLELQRIMDYSLLLGVHYRAPQQLRLMSYNQSINADGLAILAEEDPLEDEVSNYPEGLVLVPRGADDESVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEMQMFHETYDVVLYLGIIDILQEYNMTKKIEHAYKSRQFDSLSISAVDPTFYSRRFLDFIQKVFPPNATSG* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00974 848 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 181 260 - -
Rops6g00974 848 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 413 595 IPR027484 -
Rops6g00974 848 Gene3D - 596 841 - -
Rops6g00974 848 FunFam Phosphatidylinositol 4-phosphate 5-kinase 413 595 - -
Rops6g00974 848 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 513 839 IPR002498 GO:0016307|GO:0046488
Rops6g00974 848 SUPERFAMILY SAICAR synthase-like 423 841 - -
Rops6g00974 848 Gene3D - 105 157 - -
Rops6g00974 848 Gene3D - 174 224 - -
Rops6g00974 848 Gene3D - 225 265 - -
Rops6g00974 848 CDD PIPKc_AtPIP5K_like 427 840 - -
Rops6g00974 848 SMART PIPK_2 454 842 IPR002498 GO:0016307|GO:0046488
Rops6g00974 848 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 75 202 - -
Rops6g00974 848 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 89 842 IPR023610 -
Rops6g00974 848 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 424 841 IPR002498 GO:0016307|GO:0046488
Rops6g00974 848 Pfam MORN repeat 195 216 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 126 146 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 103 123 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 80 102 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 218 239 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 241 261 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 172 194 IPR003409 -
Rops6g00974 848 Pfam MORN repeat 149 170 IPR003409 -
Rops6g00974 848 Coils Coil 396 416 - -
Rops6g00974 848 SMART morn 147 168 IPR003409 -
Rops6g00974 848 SMART morn 239 260 IPR003409 -
Rops6g00974 848 SMART morn 193 214 IPR003409 -
Rops6g00974 848 SMART morn 170 191 IPR003409 -
Rops6g00974 848 SMART morn 101 122 IPR003409 -
Rops6g00974 848 SMART morn 78 99 IPR003409 -
Rops6g00974 848 SMART morn 124 145 IPR003409 -
Rops6g00974 848 SMART morn 216 237 IPR003409 -
Rops6g00974 848 PIRSF PIP5K_plant 21 845 IPR017163 GO:0005524|GO:0016308
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00974 Rops-Chr6 23583561 23590974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00974 36 847 Acyl Lipid Metabolism Gene Families AT3G09920 75.980 0.0 1276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00974 K00889 - gmx:100805371 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00974 6 23583561 23590974 Rops6g00974 6 23583561 23590974 ECH
Rops8g03377 8 72661548 72669208 Rops6g00974 6 23583561 23590974 PCT