Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03369 ATGTTCAAGAGAATCATGAAAGGAGGGCAAAAAAAGCCCTCCAAATCAGACCCTAACGATCCATCAACCTACGGTTTCAGTCCTCCAGTCACCAACCACCTCAATCCGGCGACCGTTGTAACGGTTCCTCCGCCTTCGGGAACCATCGAACCACTCCCTCTCTTCCGCGACGTTCCGGTTTCAGAGAGACAGAACCTCTTCCTTCGGAAATTACAGATTTGCTGCCACTTGTTAGATTTCTCCGACACGCTGAAAATGGTTCGTGAGAAAGAAATCAAGAGGCAAACGTTGATGGAGTTGGTAGATTTCATTCAATCTGGTTCGGGTAAGATAACGGAGACTTGCCAAGAAGAGATGATAAAAATGGTGTCGGTGAACATTTTCCGGTGCTTACCGCCGGCGTCTCATGAGAACACGGGGCAAGAGACCAACGATCCGGAAGACGAGGAACCATGTTTGGACCCTGCGTGGCCACATTTGCAATTAGTCTATGAGCTTCTCTTAAGATACGTGGTTTCCTCTGATACTGATACGAAAGTTGCTAAACGTTACATTGATCATTCCTTTGTGTTAAAATTGCTTGATTTGTTTGATTCTGAGGACCCCAGAGAGCGTGAGTATTTGAAAACAGTATTGCATCGTGTGTATGGGAAATTCATGGTTCATAGGCCGTTTATTAGGAAGGCTATTAACAATATCTTTTATCGGTTTATGTATGAGACTGAGAGGCATAGTGGGATAGGGGAGCTTCTAGAGATTCTTGGGAGTATTATCAATGGGTTTGCGTTGCCCATGAAGGAGGAGCATAAGCTTTTTCTTGTGAGGGCGCTTTTGCCCCTGCATAAACCTAAGTCTGTTGGTATGTACCATCAGCAGTTGTCATATTGTATCTCTCAGTTTGTTGAGAAGGATTACAAGCTGGCGGATACTGTTGTTAGGGGTTTGTTGAAGTACTGGCCAGTTACTAATTGCCAGAAGGAAGTTCTCTTCCTTGGGGAACTTGAGGAGGTGCTGGAGGCCACGCAAGCTGCAGAATTCCAACGCTGCATGGTTCCTCTTTTCAGACAGATTGCCCGTTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAGCCCTCTTTTTGTGGAATAATGAGCACATTGTCAGCTTAATTGCCCAAAACAGGACTGTAGTATTACCCGTAATATTTGAAGCATTGGAGAAAAATATCCAGAGTCATTGGAACCAGGCAGTTCACGGGCTGACCGTGAATGTTCGGAAAATGTTCTTGGAAATGGATGCTGAATTGTTTGAAGAGTGTCAGAGGCAATATGCAGAGAGAGAGGCTAAAGCTAAAGAGGTGGAAGAGCAGCGGGAATTGAATTGGAAGAGACTAGCAGATGCGGCTGCACAAAATGGGGTGGATATGGTCACAGCTTAG 1422 0.4543 MFKRIMKGGQKKPSKSDPNDPSTYGFSPPVTNHLNPATVVTVPPPSGTIEPLPLFRDVPVSERQNLFLRKLQICCHLLDFSDTLKMVREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMVSVNIFRCLPPASHENTGQETNDPEDEEPCLDPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTVLHRVYGKFMVHRPFIRKAINNIFYRFMYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGMYHQQLSYCISQFVEKDYKLADTVVRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQIARCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPVIFEALEKNIQSHWNQAVHGLTVNVRKMFLEMDAELFEECQRQYAEREAKAKEVEEQRELNWKRLADAAAQNGVDMVTA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03369 473 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 40 466 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops8g03369 473 SUPERFAMILY ARM repeat 64 445 IPR016024 -
Rops8g03369 473 PIRSF PP2A_B56 11 471 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops8g03369 473 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 52 463 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops8g03369 473 Coils Coil 431 451 - -
Rops8g03369 473 MobiDBLite consensus disorder prediction 15 30 - -
Rops8g03369 473 Gene3D - 59 462 IPR011989 -
Rops8g03369 473 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 59 462 - -
Rops8g03369 473 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03369 Rops-Chr8 72541311 72551847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03369 K11584 - gmx:100798308 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03369 8 72541311 72551847 Rops8g03369 8 72541311 72551847 ECH
Rops8g03369 8 72541311 72551847 Rops6g00984 6 23713771 23720319 PCT