Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00984 ATGTTCAAGAAAATCATGAAGGGAGGGCACAAGAAGCCCTCCAAATCCGACTCCAACGATCCACCGGCGGCGGCGTTTACCGGAAACAACCGTAATTCATCGGCGGCGGTTTCAACCAATGTGGTCGTCAATCATGCCTCGCGCGGTGGCGGCGGAGGAAACGCGCCTGCGAATTCTTCCTTGGCGATGATGCCGGTTGCCCCGCCGTCCGGCGCCATGGAACCGGTGCCTTTGTTTCGCGACGTGCCGGTTTCTGAGAGGCAGAACCTCTTCCTCCGGAAGCTTCACATATGCTGCTACGTTCTCGATTTCTCTGACACGTTGAAGAACGTTAGGGAGAAAGAGATCAAGCGTCAAGCGTTGATGGAGCTCGTGGAGTTTATCCAATCGGGTTCTGGCAAGATATCGGAGAATTGCCAGGAAGAGATGATCAGAATGATCTCCATCAACATTTTCCGGTGCTTGCCGCCGGCGTCTCACGAGAACACCGGTCAGGAACCCACTGATCCTGAAGAAGAAGAACCTTGCTTGGATCCTTCATGGCCACACTTGCAACTCGTTTACGAGCTTCTCCTCAGATACGTGGTTTCATCAGACACTGATACCAAGGTTGCAAAACGGTACATTGATCACTCTTTTGTGCTCAAGTTGCTTGATTTGTTTGATTCTGAGGACCCAAGAGAACGTGAGTATTTGAAAACCATCCTCCATCGTATATATGGCAAGTTCATGGTTCATAGGCCCTTCATTAGGAAGGCGATTAACAACATTTTTTATCGGTTTATATATGAGACTGAGAGGCATAGCGGTATCGGGGAGCTTCTAGAGATTCTCGGGAGTATCATAAATGGGTTTGCTTTACCCATGAAAGAGGAGCATAAGTTGTTTCTTGTTAGGGCTCTTTTGCCTCTGCATAAACCTAAGTGTGTTGCTATGTACCACCAGCAGTTATCTTATTGCATCACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCGGATGCAGTTATTAGGGGATTGTTGAAGTATTGGCCTGTCACCAATTGCCAGAAGGAAGTTCTCTTCCTTGGAGAACTTGAGGAAGTTCTGGAGGCCACACAGGCTGCAGAATTCCAGCGCTGCATGGTTCCCCTTTTTAAACAGATTTCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAGAGAGCTCTCTTTTTGTGGAATAATGAGCATATTGTGAGCTTAATCGCTCAAAACAGGACTGTGATATTACCGATAATATTTGAAGCGTTTGAGAAAAATATTGAGACTCATTGGAACCAGGCAGTTCACGGGCTGACAGTGAATGTTCGCAAAATGTTCTTGGAAATGGATGCAGAATTGTTCGAAGAGTGTCAGAGGCAGCATGCAGAGAAAATGGCTAAAGCCAAAGAAGTGGCAGAGCGGCGGGAACTGAATTGGAAGAGACTTGCAGATGCGGCTGCGCAGAACGGGGTGGAGGATATGGTCACAGATTAG 1497 0.479 MFKKIMKGGHKKPSKSDSNDPPAAAFTGNNRNSSAAVSTNVVVNHASRGGGGGNAPANSSLAMMPVAPPSGAMEPVPLFRDVPVSERQNLFLRKLHICCYVLDFSDTLKNVREKEIKRQALMELVEFIQSGSGKISENCQEEMIRMISINIFRCLPPASHENTGQEPTDPEEEEPCLDPSWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKCVAMYHQQLSYCITQFVEKDFKLADAVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFKQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNIETHWNQAVHGLTVNVRKMFLEMDAELFEECQRQHAEKMAKAKEVAERRELNWKRLADAAAQNGVEDMVTD* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00984 498 SUPERFAMILY ARM repeat 88 467 IPR016024 -
Rops6g00984 498 MobiDBLite consensus disorder prediction 1 32 - -
Rops6g00984 498 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 77 487 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops6g00984 498 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 83 486 - -
Rops6g00984 498 Gene3D - 83 486 IPR011989 -
Rops6g00984 498 PIRSF PP2A_B56 3 497 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops6g00984 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00984 Rops-Chr6 23713771 23720319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00984 K11584 - gmx:100795277 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00984 6 23713771 23720319 Rops6g00984 6 23713771 23720319 ECH
Rops8g03369 8 72541311 72551847 Rops6g00984 6 23713771 23720319 PCT