Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03365 ATGGCATCGTTGCGTACTGACGACGTGTCATTGTCTCCTCCTATGCGGGCAAAAGCTAACAACAATCGCCACCAACAACATTGGATAGTGTTGAATTACAAGCACAAGAAGAAGAAGAAGAAGAAGAAGAAAACCATTATGGGCATATTACAGGATGACATAGTGATTATCAAGCCACCAGAGAAAGAAGGTGAAACAACCGTCATAACTGTGAATTGCCCCGACAAGACTGGTCTAGGTTGTGATTTGTGTCGCATCATTCTCATTTTTGGTCTTAGCATTGTCCGAGGAGATGTATCAACCGATGGGAAATGGTGCTACTTAGTTTTCTGGGTGGTGGGGAAACAAAAGACGAGGTGGAGTTTGTTAAAGAAGAGGCTAATTGGGGCATGCCCTTCTTGTTACTCAGCTTCTGGAATTTCTTATTACCGCTCTGAATTACAGCAGCCTCCAAAGCCTCCAGATGTGTTCCTTTTGAAATTTTGTTGCCATGATCGTAAAGGCCTTTTACATGATGTCACAGAGGTTCTTTGTGAGCTAGAGCTTAACATAAAGAAAGTGAAGGTCTCTATTACACCTGATGGCAAAGTGGTGGATCTGTTTTTCATCACGGATACTAGGGAACTTCTACATACAAAGAAGAGAAAGGATGACACAATTGAGCAGTTAGCAGCCATTTTGGAGGATGCCTTAATTACCGTTGACATTCAATTGGTTGGCCCAGAAATTACTGCTTGTTCTCAAGCATCTTCATTCCTTCCGAATGCGATCACAGAAGATGTCTTTGATTTGGAAAGTGGGACTTTCACTTCAGATTCTGTTTCTATTGCAATGGACAACATGCTGAGTCCTGCTCACACGCTTGTCCAAATTATGTGCCACGATCACAAAGGTCTTCTTTATGACATCATGAGAACTATGAAGGACTACAATATTCAGATTTCTTATGGTCGATTCTCAACAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAATCAGATGGGAAAAAGATAATTGATCCCGGCAAGCAGAAGTCTTTGTCATCACGCCTTAGAATGGAACTACTTCGTCCGCTCAAAGTAGCTGTTGTAAACAGGGGCCCTGATGCAGAGTTGCTGGTTGCAAATCCTGTGGAGTTGTCTGGCAAAGGAAGGCCTCTTGTTTTCTATGATATCACTCTTGCTCTCAAAATGCTTGGCCTTTGCATCTTTTCGGCTGAAGTTGGAAGACACGTGATTGGAGACCGGGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGGGGAGGATTCATCTGTTCCAAGGAACAAGATTGAGAAAGGAGTTTGGAAAGTGTTGATGGGTTGGGAGTGA 1362 0.4266 MASLRTDDVSLSPPMRAKANNNRHQQHWIVLNYKHKKKKKKKKKTIMGILQDDIVIIKPPEKEGETTVITVNCPDKTGLGCDLCRIILIFGLSIVRGDVSTDGKWCYLVFWVVGKQKTRWSLLKKRLIGACPSCYSASGISYYRSELQQPPKPPDVFLLKFCCHDRKGLLHDVTEVLCELELNIKKVKVSITPDGKVVDLFFITDTRELLHTKKRKDDTIEQLAAILEDALITVDIQLVGPEITACSQASSFLPNAITEDVFDLESGTFTSDSVSIAMDNMLSPAHTLVQIMCHDHKGLLYDIMRTMKDYNIQISYGRFSTKPRGKCEIDLFIMQSDGKKIIDPGKQKSLSSRLRMELLRPLKVAVVNRGPDAELLVANPVELSGKGRPLVFYDITLALKMLGLCIFSAEVGRHVIGDREWEVYRILLDEGEDSSVPRNKIEKGVWKVLMGWE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03365 453 ProSiteProfiles ACT domain profile. 158 241 IPR002912 -
Rops8g03365 453 SUPERFAMILY ACT-like 154 228 IPR045865 -
Rops8g03365 453 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 54 434 IPR040217 -
Rops8g03365 453 Gene3D - 155 239 - -
Rops8g03365 453 Pfam ACT domain 159 214 IPR002912 -
Rops8g03365 453 SUPERFAMILY ACT-like 64 126 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03365 Rops-Chr8 72497166 72500498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03365 - - gmx:100818216 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03365 8 72497166 72500498 Rops8g03365 8 72497166 72500498 ECH
Rops8g03365 8 72497166 72500498 Rops6g00988 6 23792636 23796417 PCT