Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00988 ATGGGAATACTGTACGACGACGTAGTGATTATAAGGCAGCCAGAGAAAGAAGGTGACCCAACTGTGATTACTGTGAATTGCCCTGACAAGACTGGACTTGGTTGTGATTTGTGTCGTATTATTCTCTTCTTTGGTCTCAACATTGTCAGAGGAGATGTATCAACGGATGGGAAGTGGTGCTACATAGTTTTCTGGGTGGTTGGGAAACAGAAGACGAGGTGGGGTTTGTTGAAGAAGAGGCTTGTTGGGACTTGCCCTTCTTGTTCCTCAGCTTCTGGAATCTCTTATTATCGCTCTGATTTGCAGCCACCAAAGCCTCCTGATGTCTTCCTTTTGAAGTTTTGCTGTCATGATCGGAAAGGCCTATTACATGATGTAACAGAGGTTCTTTGTGAGCTAGAGCTCACTATAAATAAAGTGAAGGTATCCACTACACCTGATGGAAAAGTGATGGATCTGTTTTTCATCACAGATAACAGGGAACTTCTACATACAAAGAAGAGAAAGGATGACACCATTGAGCAGTTAACAGATATTTTGGAGGATGCCATCATTACTATTGACATTGAATTGGTTGGACCAGATTTTACTGCTTGTTCCCAGGCATCTTCATTCCTTCCAGCTGCAATCACAGAAGATGTCTTTGATTTGGAATTGCCTGATTTGGTTCGAAGTGGAACTCTCAGATCAGATTATGTTTCTATCACGATGGACAACTTGCTTAGTCCTTCTCACACCCTTGTGCAAATTATGTGCCAAGACCACAAAGGTCTTCTTTATGACATAATGAGAACTCTGAAGGACTACAACATTCAGATTTCTTATGGGCGTTTCACAACAAAACCTAGAGGAAAATGTGAGATTGATTTGTTCATCATGCAAGCAGATGGAAAAAAGATAGTTGACCCCAACAAGCAGAATTCTTTGTCATCACGCCTTAGAATGGAACTACTTCGTCCACTCAGAGCAGCTGTTGTGAGCAGGGGCCCTGATACTGAGCTTCTGGTTGCAAACCCTGTGGAGTTGTCTGGCAAGGGACGGCCTCAAGTTTTTCATGATATCACTCTTGCTCTCAAAATGCTTGGCATTTGCATCTTTTCGGCTGAGATAGGGAGACATGTGATTGGAGACCGTGAATGGGAGGTTTATAGAGTGTTGCTTGATGAAGGGGAAGAGTTATCTGTTCCAAGGAACAAGATTGAGGAGGGAGTATGGAAAATTCTAATGGGTTGGGAGTAA 1239 0.4278 MGILYDDVVIIRQPEKEGDPTVITVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQKTRWGLLKKRLVGTCPSCSSASGISYYRSDLQPPKPPDVFLLKFCCHDRKGLLHDVTEVLCELELTINKVKVSTTPDGKVMDLFFITDNRELLHTKKRKDDTIEQLTDILEDAIITIDIELVGPDFTACSQASSFLPAAITEDVFDLELPDLVRSGTLRSDYVSITMDNLLSPSHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRAAVVSRGPDTELLVANPVELSGKGRPQVFHDITLALKMLGICIFSAEIGRHVIGDREWEVYRVLLDEGEELSVPRNKIEEGVWKILMGWE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00988 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Rops6g00988 412 Gene3D - 108 192 - -
Rops6g00988 412 CDD ACT_ACR-like_4 338 411 - -
Rops6g00988 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Rops6g00988 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Rops6g00988 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Rops6g00988 412 SUPERFAMILY ACT-like 243 295 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00988 Rops-Chr6 23792636 23796417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00988 - - gmx:100816138 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00988 6 23792636 23796417 Rops6g00988 6 23792636 23796417 ECH
Rops8g03365 8 72497166 72500498 Rops6g00988 6 23792636 23796417 PCT