Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03347 ATGGGAGAGCAAAAAGAGAAGCCGAAGAATGAGACTCATAAGAAGCCCCACGGAGGATCCGAGAAAAACGACGGACCCGCTCCTGTCGTTTTGAAACTAGACATGCATTGCGAGGGATGCGTCAAGAAGATAAAACGTGCCGTTCGCAATTTCGACGGTGTGGATGACGTTAAGGCCGATATGTCCGGTAACAAACTAACGGTTATTGGAAAAATGGACCCCGCCAAGGTGAGAGATAAACTGGCCGAGAAAATTAAGAAGAAGGTTGAGCTCGTTTCTCCTCAACCCAACAAAGACGCCGGCGGTGAGAAACCACCGGAGAAGAAGCCTGAACAGAAGAAACCAGAGGAACAAAAAAAGCCCGAAGAGAAAAACTCGAAACAGAGCACGGTGATTTTGAAGATCAGATTGCACTGTGACGGTTGCATTCAAAAACTTCAAAAGATGATCCTCAAGACCAAAGGAGTTGAATCGGTGAATATTGAGGGAGGGAAGGATTTGGTGACGGTAAAGGGAACAATGGATGTGAAGGAAATGGTACCGTATTTGAAGGAGAAGCTGAAGCGAAACGTGGAGGTGGTCCCACCCAAGAAAGATGGAGGAGCTGAACAGAAGGAGAAGAACAAGGAAACTGGGATTAGTGAAAAGAAAGAGGGTGGTGGTGGCAAAATAGAGGAGGTGGTGGTGGTTAACAAAATGGAGCATCACGGTTACGGATACGGGTACCCACCTCCCATGTATTGGCACGATGGATCCGAACCTGGCCAAAGCAGCAGTAGCAGCAGCAGCTATGCAGTGGAGGTTCAGCCAGGGTATTGGAATCAAGGTTCTAATTATGGGAACCAGCATGAGTATGTTGGGAATCAAGGGTACATGGTAGAGCCACCCCCAGATTACTTGCATCCTCATCATCCACCTCCACAGATGTTCAGTGATGAGAATCCCAATGCTTGTTCCCTGATGTGA 966 0.4783 MGEQKEKPKNETHKKPHGGSEKNDGPAPVVLKLDMHCEGCVKKIKRAVRNFDGVDDVKADMSGNKLTVIGKMDPAKVRDKLAEKIKKKVELVSPQPNKDAGGEKPPEKKPEQKKPEEQKKPEEKNSKQSTVILKIRLHCDGCIQKLQKMILKTKGVESVNIEGGKDLVTVKGTMDVKEMVPYLKEKLKRNVEVVPPKKDGGAEQKEKNKETGISEKKEGGGGKIEEVVVVNKMEHHGYGYGYPPPMYWHDGSEPGQSSSSSSSYAVEVQPGYWNQGSNYGNQHEYVGNQGYMVEPPPDYLHPHHPPPQMFSDENPNACSLM* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03347 321 SUPERFAMILY HMA, heavy metal-associated domain 30 91 IPR036163 GO:0046872
Rops8g03347 321 MobiDBLite consensus disorder prediction 284 321 - -
Rops8g03347 321 Gene3D - 26 99 - -
Rops8g03347 321 ProSiteProfiles Heavy-metal-associated domain profile. 128 195 IPR006121 GO:0046872
Rops8g03347 321 MobiDBLite consensus disorder prediction 87 129 - -
Rops8g03347 321 ProSiteProfiles Heavy-metal-associated domain profile. 26 93 IPR006121 GO:0046872
Rops8g03347 321 SUPERFAMILY HMA, heavy metal-associated domain 129 185 IPR036163 GO:0046872
Rops8g03347 321 MobiDBLite consensus disorder prediction 195 220 - -
Rops8g03347 321 MobiDBLite consensus disorder prediction 101 129 - -
Rops8g03347 321 MobiDBLite consensus disorder prediction 1 21 - -
Rops8g03347 321 CDD HMA 35 87 IPR006121 GO:0046872
Rops8g03347 321 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 9 321 IPR044594 GO:0046872
Rops8g03347 321 Gene3D - 126 199 - -
Rops8g03347 321 MobiDBLite consensus disorder prediction 1 28 - -
Rops8g03347 321 Pfam Heavy-metal-associated domain 135 192 IPR006121 GO:0046872
Rops8g03347 321 Pfam Heavy-metal-associated domain 33 88 IPR006121 GO:0046872
Rops8g03347 321 CDD HMA 137 172 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03347 Rops-Chr8 72186268 72188096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03347 - - gmx:100795652 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03347 8 72186268 72188096 Rops8g03347 8 72186268 72188096 ECH
Rops8g03347 8 72186268 72188096 Rops6g01004 6 24074847 24076603 PCT