Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03336 ATGTACCTTCCCTGTGCCAACAGTGATTTCTCATCGACAACCTCTTCTTCTTCTTTCTCTTTGCAGTTTCACTTTCTGAATTCAGTTGCTGCTGAATCCAAGCTTATTTATACAGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTCATTATAGTCCGGGCTACTATAGCAACATGATTCAACATGATACTGGTGACATCTATAATGGACACTATTTCCATTGCCATTATGATAATGAATGCAACCATGTAGAGAATGATGAGATCATTGCCCGTACTCTTCAAGAAGAGTTTTCACAGCTAGAAATTGCTGAATCTTCAAGGTATTTACAGGCAAGTGAAGAACAGTTCCATGTTCCTGAGACCGAGCCTGCATATGACTGGCAGAACTCTTCAATGATGAATTATTGTTCAGGAGGTCATGACTATGCCCAAGAAGGAGTTGGTGATGTAGAACCTTCTAGTTCGTGTTCTAGTCCTTGTGAAACAGAGGAATATCCGTTGGAGCTGACTGACAATTATCCACTTGATGATGAAGTAGAGAGGAGATTGAGTCAAATTATCCCGATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCATCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAATTATACGACTTTGTGGAGCACAAGGTGCATGGTGATGGTAATTGCCAGCCGCAGATTTTGAGCAGCCAAAGACACTTATGCCCTCTACATTGGTTCCGTGCACTGTCTGATCAACTATATAATGCACCTGATCGCCACAGGTTTGTGAGGAGACAAGTTGTCAATCAGCTGAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAATATGGTGACTATTTGGAGAACATGTCAAAGAGTGGAGAATGGGGTGATCATGTCACTCTTCAAGCAGCTGCAGACTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTCCTGAGTTTTTGGGCAGAGGTGCATTACAATTCCATCTACCCTCAAGGAGATATACCTTCAAATGAGTCAAGAAAGAAGAAAAGATGGTGGAACTTTGGGAGTAAGCATTAG 1158 0.4093 MYLPCANSDFSSTTSSSSFSLQFHFLNSVAAESKLIYTDVFQWGLNLLDGDPHYSPGYYSNMIQHDTGDIYNGHYFHCHYDNECNHVENDEIIARTLQEEFSQLEIAESSRYLQASEEQFHVPETEPAYDWQNSSMMNYCSGGHDYAQEGVGDVEPSSSCSSPCETEEYPLELTDNYPLDDEVERRLSQIIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVHGDGNCQPQILSSQRHLCPLHWFRALSDQLYNAPDRHRFVRRQVVNQLKSNPEIYDGYVPMEYGDYLENMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSNESRKKKRWWNFGSKH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03336 385 ProSiteProfiles OTU domain profile. 225 364 IPR003323 -
Rops8g03336 385 SUPERFAMILY Cysteine proteinases 211 364 IPR038765 -
Rops8g03336 385 CDD OTU_plant_OTU9-like 216 362 - -
Rops8g03336 385 Gene3D - 252 368 - -
Rops8g03336 385 PANTHER OTU DOMAIN CONTAINING PROTEIN 85 365 - -
Rops8g03336 385 Pfam OTU-like cysteine protease 253 332 IPR003323 -
Rops8g03336 385 FunFam OTU domain-containing protein 207 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03336 Rops-Chr8 72048124 72054575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03336 - - aip:107648617 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03336 8 72048124 72054575 Rops6g02418 6 44234406 44240634 ECH
Rops8g03336 8 72048124 72054575 Rops8g03336 8 72048124 72054575 ECH