Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02418 ATGGCAACACATGACATGGATCCTGATGTTGTTCGCTGGGGTCTTCATCTCTTGGATGTTTGCACATTTTCCCATAGAGGTTCTCCTAGTATCATAACTCAATACGATCCAGATTTAAGTCAAGTTGAATATGTTATGGAAGGCTTCTGTCAGCATTCATATGTGGAGAATGATGAGGCTGTTGCACGTGCTTATCAAGAAGAATTGTCGCAACTTGATTCCACGGAAGCTTCTGGAATGTCGAATTTTGAGAATGAGCAAGTTCGAGCATCCGTTTGTGCACAAGATTGGATTTATTCTCCCAATGGAAACTATGACTTTGGTCAACAACACGAAGGCAATGACTCTTGCCAGAGCTCTGTAGATGAGTCATACAATATGAAAGAACTGGAGCATTGTGGTCATGAAATTGGAGTTTTTGGTTCGTCTTCTGGGTCAGGTGGGTTACCTGTTACCGGTGATGACTTTTGGCATTCATTGGACATATCAGATGAATCTTCTCTTGATGGTGAAGTAGGCAAAAGATTAAACGAGATGCTTCCCATTCCTCATATTCCTAAAACCAATGAAAAAATACCGTCTGATGATGAAGAAATATCAGATCATCAAAGGCTACTAGACAGACTGCAGTTATATGAACTGGTTGAGTCTAAGGTTGAAGGAGATGGCAACTGCCAGTTTCGTGCTTTGTCAGATCAACTCTATCGCTCTCCAGATCACCACAAATTTGTGCGGGAGCAAATTATTCAACAGCTCAATTCTTACCCAGAAATATATGCGGGTTACGTTCCTATGGCTTATAGTGATTATTTGAAGAAGATGAGCAAGAGCGGTGAATGGGGTGATCATGTCACGTTGCAGGCTGCTGCAGATTGGTTTGGTGTCAAAATTTTTGTTATTACATCTTTTAAGGACACATGTTACATTGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATTTATCCAGAAGGAGAAGAATTGCCTCCATCCTCTGGCAAGAAAAAGAAGAGATGGTGGAATTTGGGTGGCTAG 1077 0.4132 MATHDMDPDVVRWGLHLLDVCTFSHRGSPSIITQYDPDLSQVEYVMEGFCQHSYVENDEAVARAYQEELSQLDSTEASGMSNFENEQVRASVCAQDWIYSPNGNYDFGQQHEGNDSCQSSVDESYNMKELEHCGHEIGVFGSSSGSGGLPVTGDDFWHSLDISDESSLDGEVGKRLNEMLPIPHIPKTNEKIPSDDEEISDHQRLLDRLQLYELVESKVEGDGNCQFRALSDQLYRSPDHHKFVREQIIQQLNSYPEIYAGYVPMAYSDYLKKMSKSGEWGDHVTLQAAADWFGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGEELPPSSGKKKKRWWNLGG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02418 358 PANTHER OTU DOMAIN CONTAINING PROTEIN 57 340 - -
Rops6g02418 358 ProSiteProfiles OTU domain profile. 214 338 IPR003323 -
Rops6g02418 358 Coils Coil 55 75 - -
Rops6g02418 358 Gene3D - 195 342 - -
Rops6g02418 358 Pfam OTU-like cysteine protease 221 306 IPR003323 -
Rops6g02418 358 SUPERFAMILY Cysteine proteinases 175 337 IPR038765 -
Rops6g02418 358 CDD OTU_plant_OTU9-like 205 336 - -
Rops6g02418 358 FunFam OTU domain-containing protein 196 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02418 Rops-Chr6 44234406 44240634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02418 - - gmx:100820379 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03336 8 72048124 72054575 Rops6g02418 6 44234406 44240634 ECH
Rops6g02418 6 44234406 44240634 Rops6g02418 6 44234406 44240634 ECH