Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03301 ATGGACCCGAAGGTCCTGAAATTCCAGATCCTTAATGGGTCAATTGCAAGGCGCGTGTTTTTACGCTCAATCGTACTTGCCTCTGCCATTTCCATGGTGGCTCTGCTACGCACCATGTCGGTTTTCGATTTGGGATCCTTGGCTCCCATTACCACTTCTATTAACTGCAATTCGTGTTTTGAAAACATCACTTCGAGTACCCCCAGTTCCTATTTGTTTCGAAACCGCTTCTGGGGTTCCATGAATTGCGAGAAAGATGTCAACTTGACCGTGAATGTGGTCAATGAGCTAATGGGCAAGCACTTGTTGGAATACGGAGCCAAGAGCCTTTGTATTGGAGAAGGGTCCCCAATTACCGTCACTGCAATGAAACAGTTGGGATTCTCCAGTGTCTTTGGTGTTTACACACACCGTTTTTTCTCCCTCAAGCAGAAGAAGATCGTGTATGAGCTTGATTATCAGGACTCTTCTTTCGATTTCGTGTTGTCTAGGGACCTCGACAGGGTTTCAGTCCCTGCATTGCTCGTGCTTGAGGTTGAGCGTGTCCTTAAGCCTGGTGGAATAGGTGCCCTTCTTGTAGGTGCCACAGGTTCCCACCCCAATGATTTGATAAGGTCAGCTACACCAGTTTCCTCATTATTGAGGTCTTCCAGTGTTGTGCATGTGGGTTCTATCAATGAACTTATTAACATTGTGGTTTTCAAGAAAAGATCTGAAAATGCCACTTCCTTCTATCAGTATAATTTACCAGCGGATTGTCCAAGTCTTACCTTGACCAAACCTCTCATAGAGCTGATGGAACCCCTTGTGGGTGAAAAACCACCTCCTGGATATGAGAAAAGGATCCCCTATTTGCCTAAGTTTGTGGATGTTTCTACTAGGAAGCGGATGGTGTATATTGATATTGGGGTAGGGGAGCTTCTGAATGCAAATGTCAGTGATTGGTTCCTCCCATCATATCCCATTGATCAGAAAGCTTTCAATGTCTATTTTGTTCACTACAATACTTCAGTGCTGTTGTCCTATGTGAAGAGACCTGGTATCACCTTTGTTTATCACCCTGGATTGGCTGGTAAGGTCATGGCTGATCTTGGTACTGATGGAGACCTGGATCCTTATATCGGGGAGGAAGAGTTTGATTTCGTGGCCTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTTGTCCTGAAGATGAATGCTGGAAAGGTTGAACTCAAGTTCCTCTCGGATATATTTGACAGTGGAGCTATATGCTATGTTGATGAGTTGTTTCTCAGATGTCCCGAGAGGGGAGATGATGATAAAATTATGACCAGCAAGGAAAGCTGCATGGATATTTACAAGGGTCTAAGAAGCAATGGCGTCTATGTCCATCAATGGTGGGGAGACTAA 1395 0.4459 MDPKVLKFQILNGSIARRVFLRSIVLASAISMVALLRTMSVFDLGSLAPITTSINCNSCFENITSSTPSSYLFRNRFWGSMNCEKDVNLTVNVVNELMGKHLLEYGAKSLCIGEGSPITVTAMKQLGFSSVFGVYTHRFFSLKQKKIVYELDYQDSSFDFVLSRDLDRVSVPALLVLEVERVLKPGGIGALLVGATGSHPNDLIRSATPVSSLLRSSSVVHVGSINELINIVVFKKRSENATSFYQYNLPADCPSLTLTKPLIELMEPLVGEKPPPGYEKRIPYLPKFVDVSTRKRMVYIDIGVGELLNANVSDWFLPSYPIDQKAFNVYFVHYNTSVLLSYVKRPGITFVYHPGLAGKVMADLGTDGDLDPYIGEEEFDFVAWFKETVQYADFVVLKMNAGKVELKFLSDIFDSGAICYVDELFLRCPERGDDDKIMTSKESCMDIYKGLRSNGVYVHQWWGD* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03301 464 Pfam Methyltransferase domain 148 188 IPR013216 GO:0008168
Rops8g03301 464 PANTHER PEPTIDE UPSTREAM PROTEIN 1 464 - -
Rops8g03301 464 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 194 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03301 Rops-Chr8 71616244 71618300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03301 - - gmx:100783651 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03301 8 71616244 71618300 Rops6g01050 6 24816007 24817461 PCT