Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01050 ATGGATTCCAAGGGCTTCAAATTCCACAACCTTGGTGGTTCCATAGCCAAACGTGTGTTATTCCGAGCATTGTTACTTGCCTCTGCTATTTCCATCGTTTCTCTGCTCCGTTTCCTATCCACCATCGATATAGGATCCTTAGCTCCTAAGACCTATGATGACTGCATAGCTGGTTCTGATGATTCACTTTCCAAAAATGGCACTTTAACTCCCGGTTCCTACTTGTTTCAAAGTCGGATCCTAAACACCTTTTGGGGTTCCTTTGACTCCTTAAATTGCAAGAAAGATTTCCACTTGACTTCCAGTGTTGTCACAGAGCTAATGGGTAAACGACTTTTAGACTGTGGCGCACAAAGTCTCTGCATTGGAGAAGAATCACACATAGCTGTCTCCACAATGCAACAGTTGGGATTCTCTAGTGTAAGTGGTGTCCACAAGCACCATTTTTTCTCACTCAAACAGAAGAAAATCGTGTACCAGCTTGAGTACCGGGATTGTTCTTTTGATTTCGTGTTTTCCAAGGATCTAGACAAGGTTTCAGTCCCTTCATTGTTCATGCTTGAGGTTGAGCGTATCTTGAAGCCTGGTGGAATTGGTGCCTTGCTTGTGGATTTGGCTGCTAGTGGTTCTTATTCCACCGACCCCAATGACTTGATAAGATCTTCTACTCCAGTGTCATCGTTGTTGAGATCTTCCAGCATTGTCCATGTTGGTCATGTCAATGAGCATAGCCTTATGGTTTTCAAGAAAAGATCTGAAAACACAAGCTACTCTTTCTATAATCATGGTCTTCCAGAAGACTGTGCAAGTGTTCACTTCACCAAGCCTTTCATGGAGCTTATGGAACCTCTTGTGGAGGAAACCCCACCTCCTGAATATGAGAAAAGCATCTCCTATTTGCCTAAGTTTGTTGATGTTTCTAGTAGGAAGCGTTTGGTGTATGTTAACATTGGGGTAGGGGAGAACGAAGGTGTCACTGGTTATTGGTTCCCAACATCTTATCCCATTGATCAGAAAGCTTTTGGTGTGTATTTGGTTCATTACAACACTTCCATTATGTTGTCCCATGTGAAACGACCTCGTGTCACCTTTGTTTATCATCCGGGTTTGGCTGGAAAAGTTGGAGATGCAGCCAAGCCTGATCCTTTTCTGGGAGAGGAAGAGTTTGATTTCCTTGCATGGTTCAAAGAAACTGTGAAGAATGCGGATTTCGTGGTCCTGAAGATGAATGCGGGGAAAGTTGAAATGAAGTTCCTCTCCGATATATATGAAAGTGGAGCTGTATGCTTCGTTCACGAGCTATTTCTCAGCTGTTCAGAGAGTGGAGATGGTGAAAGCGAAACTATGAGCAGCTGCATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTATGTTCATCAATGGTGGGATACTAAATTGCATCAAGGGCCTAAGGTGTCATATGAACGGTGA 1455 0.4337 MDSKGFKFHNLGGSIAKRVLFRALLLASAISIVSLLRFLSTIDIGSLAPKTYDDCIAGSDDSLSKNGTLTPGSYLFQSRILNTFWGSFDSLNCKKDFHLTSSVVTELMGKRLLDCGAQSLCIGEESHIAVSTMQQLGFSSVSGVHKHHFFSLKQKKIVYQLEYRDCSFDFVFSKDLDKVSVPSLFMLEVERILKPGGIGALLVDLAASGSYSTDPNDLIRSSTPVSSLLRSSSIVHVGHVNEHSLMVFKKRSENTSYSFYNHGLPEDCASVHFTKPFMELMEPLVEETPPPEYEKSISYLPKFVDVSSRKRLVYVNIGVGENEGVTGYWFPTSYPIDQKAFGVYLVHYNTSIMLSHVKRPRVTFVYHPGLAGKVGDAAKPDPFLGEEEFDFLAWFKETVKNADFVVLKMNAGKVEMKFLSDIYESGAVCFVHELFLSCSESGDGESETMSSCMDIYKGLRSNGVYVHQWWDTKLHQGPKVSYER* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01050 484 Pfam Methyltransferase domain 158 198 IPR013216 GO:0008168
Rops6g01050 484 PANTHER PEPTIDE UPSTREAM PROTEIN 1 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01050 Rops-Chr6 24816007 24817461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01050 - - lja:Lj5g3v0626880.1 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03301 8 71616244 71618300 Rops6g01050 6 24816007 24817461 PCT