Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03236 ATGAATGTGGTGGGAAGAGTCGGAAGCTTGATAACACAAGGTGTCTATTCAGTTGCCACCCCTTTTCACCCTTTTGGTGGGGCTGTTGATGTCATTGTTGTTCAGCAGCAAGATGGGACGTTTCGGAGCACGCCATGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCTGAGAAGATTGTTAGGATAAGTGTCAATGGTGTTGAAGCAAACTTCCATATGTATCTTGACAATTCAGGGGAGGCTTATTTTGTTAAAGAGGCGGGGGATGATGATAAAGAAGTCAAGTCAAATGGGGTTGCTGAAGCTGCTACTAATTCTGAATTTACCCGAGAAGATGGTGGTGTTGAAATTGACAACAAAAATAATAGTTATCTGAATATAGATGATACTCATGGTTTTAGACTTGACCATAGCATGTCTTATCCAAGGGTGCTTCAGTTGAGAGGAAAAGACCATTCCTCAGTTTTGCCACCACTTCAAAAGGCAGAATCTGATGTTGATAGGATATTTTATGAATTCCAAGATGATCAATCCTCTTTCGAAGGTTCAGTTGAATTGTCAGAATATGGGTCTGGTCGATATGAGAATCTAGATGGAGAGAATTTAGTGGACTCACTGGGTTCCCATCCGGAGGTGATCTTGGTCAGTGTTGATGGTCATATATTGACAGCCCCTATCTCAGAGTCAGAGCAGGATGGGGAGAATGTGCAGTTAAAAACTCCTCAATTTCATCTGGGCCCTGGTGAGGGGACTGACTTATTTGAAGGTGATGAGGAGTTTAGTTCTGGTGAAAATGCTTGGGCTGCTGATCAAGTTAGTCAGCTGGATGCTTCAACAGCTGATGTTCCATCCGGTAGTGGTAATGCTAACATTGGCAATAATACTTCTGGGCTCTCGCCGGAAGTTTGCCAAAGAGAGGAGGGACATATTTGTCACACAGAGGAAACCTTGTTGATTGAAAATCAAGAAGATTTTCATTTGCAAACTGTTTCAGAAGAGGTTGCGTCTTGTGTGAAGAGGGAGGGTATCTTCAAAAGTTGTTTGGCATTAGACGAACTTGCTCAGCAGGCTGGAAATGCTGATTCACAAGATGCATGTTCCTCATTGGAGGTTCAAAATTCAGCAGAGGAATCTACTGCAAATTGCTCAATTGTTGATGCAAATGAACAAGAGAGCATCAAACAATCTGGAAAAGTTGATGAGTTATCTCCCCTTAGTGGGCCTACGTCTTTGGATGACCATAATTCTCCAAAATTAGAAGTAGGACTTCGAGAGGTTGATAAAGATGCATCACGGGAAGTTGACACTGCTTCTGGCAGCCATTATGGTACTAATTATATTGAATGTAATGATGAACATATTGGCAAGTCAGTATCAAATGATGGGGAAGACGATAATCAACAAACCCCTGCACTTGAAAATGCTAGTCAGAAAAGTGAGGTAATTGAACCTCAAACAGCAACTTCCAATGAAGGGGACCGAAGTCATTCTGGTTTGAGATTTGATGTCTCACTGTGTGGCCATGAACTTAAGGCTGGTATGGGTTTGGTTGCTGCTTCTGAAGTGTTTGAAGCACATCGGATATCTGCAGAGGAATTTAGAAGTTCAGCACCATCTATAATTAAGAATGAAAATCTTGTCGTGAAGTTCGGAGAGAGGTATCTGCTGTGGGAAAAGGCTGCTCCCATTGTTCTTGGAATGGCTGTATTTGGTATAGACTTACCTGTTGAGCCCAAAGATACAATTCCTGTGGAACAGGATGATACATTGAAGTCCAGGGATGATGATCCTCGATCAGCTTCTTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGGAAAGTCAAGACAATGGAGCACACTAGTAGTAATGCTGACAGTGAGGAGATATTTGTAGATTCTGAGTCTGATTTGCTAACTCCCGTTGTTGAGTCAATTCCAACCTCTGGGCAAGAGTCTCCTCACAAGCAATTTGTAAGGACAAATGTTCCCTCTAATGAGATGATAGCATCCTTGAATCTCAAAGATGGTCAAAATTTGGTAACGTTTAGTTTCTCTACAAGGGTACTTGGAACACAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGAATTGTAATTTCTGACGTGGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTGGTTGGCAAAGATTGGACCCAGTCCGGAGTGGCAAGGCTTTTTTCAGCTATCAAGGAAAATGGATATCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAGGCTTATCTAACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGAAACACTTTACCGAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCACTTTATCGAGAAGTAATAAGAAGAGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTCTATGCGGGGTTTGGCAACAGACACACAGATGAACTTAGTTACAGAAAGATAGGAATTCCGAAGGGCAAAATATTTATTATTAACCCTAAGGGTGAGGTGGCAATAAGTCATCGTCTTGATGCAAAATCTTATACATCATTACACACACTCGTCGATGACATGTTCCCACCTACTTCTATGGTTGAGCAGGAGGACTTCAACTCTTGGAATTATTGGAGAATGCCTTCCCCAGATACTGATTAG 2742 0.4183 MNVVGRVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRISVNGVEANFHMYLDNSGEAYFVKEAGDDDKEVKSNGVAEAATNSEFTREDGGVEIDNKNNSYLNIDDTHGFRLDHSMSYPRVLQLRGKDHSSVLPPLQKAESDVDRIFYEFQDDQSSFEGSVELSEYGSGRYENLDGENLVDSLGSHPEVILVSVDGHILTAPISESEQDGENVQLKTPQFHLGPGEGTDLFEGDEEFSSGENAWAADQVSQLDASTADVPSGSGNANIGNNTSGLSPEVCQREEGHICHTEETLLIENQEDFHLQTVSEEVASCVKREGIFKSCLALDELAQQAGNADSQDACSSLEVQNSAEESTANCSIVDANEQESIKQSGKVDELSPLSGPTSLDDHNSPKLEVGLREVDKDASREVDTASGSHYGTNYIECNDEHIGKSVSNDGEDDNQQTPALENASQKSEVIEPQTATSNEGDRSHSGLRFDVSLCGHELKAGMGLVAASEVFEAHRISAEEFRSSAPSIIKNENLVVKFGERYLLWEKAAPIVLGMAVFGIDLPVEPKDTIPVEQDDTLKSRDDDPRSASSGRRWRLWPIPFRKVKTMEHTSSNADSEEIFVDSESDLLTPVVESIPTSGQESPHKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGNTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRHTDELSYRKIGIPKGKIFIINPKGEVAISHRLDAKSYTSLHTLVDDMFPPTSMVEQEDFNSWNYWRMPSPDTD* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03236 913 Pfam LNS2 (Lipin/Ned1/Smp2) 668 889 IPR013209 -
Rops8g03236 913 PANTHER LIPIN 1 913 IPR026058 -
Rops8g03236 913 Pfam lipin, N-terminal conserved region 1 101 IPR007651 -
Rops8g03236 913 MobiDBLite consensus disorder prediction 421 439 - -
Rops8g03236 913 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 506 613 IPR031703 -
Rops8g03236 913 SMART lns2 713 869 IPR031315 -
Rops8g03236 913 MobiDBLite consensus disorder prediction 383 501 - -
Rops8g03236 913 MobiDBLite consensus disorder prediction 587 606 - -
Rops8g03236 913 MobiDBLite consensus disorder prediction 465 498 - -
Rops8g03236 913 MobiDBLite consensus disorder prediction 383 417 - -
Rops8g03236 913 MobiDBLite consensus disorder prediction 587 607 - -
Rops8g03236 913 SUPERFAMILY HAD-like 705 855 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03236 Rops-Chr8 70854732 70862889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03236 K15728 - gmx:100780784 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03236 8 70854732 70862889 Rops6g01107 6 25579360 25586824 PCT