Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01107 ATGAATGTGGTAGGCAAAGTTGGAAGTTTGATAACCCAAGGTGTGTATTCAGTTGCTACCCCTTTTCACCCTTTTGGTGGGGCTGTTGATGTGATTGTTGTTCAGCAGCAAGATGGGACATTTCGAAGCACTCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCTGAAAAAGTTGTTAGAATAAATGTTAATGGTGTTGAGGCCAACTTCCATATGTATCTTGATAATTCTGGGGAGGCTTATTTTGTGAGGGAAGTGGATGATGATAAAGGAGTCGAGTCAAACGGTGGTAACAAAAATAATATTTATTTGAGTAATGGTCATAGACTTGATCATAGTGTCTCGGATTCCGGGGTGCTTCAGTTGAAAGATGAAGGTGATTCGCCAGTTGTGCCTCGAATTCAAAGGACAGAATCTGATGGGAGATATTATGAATTCCAAGATGATCGATCTTCTTTTGGAGATTCAGTTGAGTTGTCAGAATATGAGTCAAATTCATATGAGAGTCAAGAGGGAGAAAACTTCGTGGACTCACAGGGTTCCCACCCGGAGGTGGTCTTGGTGAGTGTTGATGGTCATGTATTGACGGCTCCTATCTTGGAATCAGAGCAGAATGAGGAGAATGTGCAGTTAAGAAATCCTCAATTTCATCTGGGCCCAGGTGAAGAGACTGACTTGTGTGAAGGCAATGAAGAGTTTAGTTCCGGTGAAAGTGCTTGGGCTGCTGATTATATTAGTAAGCTGGATGCTCCAACAGCTGAAGTCCAACCCAAACGTTGCAAGACTAATGGTGATGATAACACTTCTAGGCTCAAGCTTGAAGTTTGTCAACGAGAGGAGGTAAGTAATTGTCAAGTACAGGAAACCTTGGAGAATAAAAATCAAGAAGATCTTCATGTGAAAACTGATACAGAAGGGGTTGTATCTGGTATCAATAGGGAGAATGTTTTCCAAAGCTGTTTGGAGCTACAAGAATTTGCTCAGCAGGCTGGAAATGCTGATTTACGAGATGGAGGTTCATCATTGGAGGTTCAAAATTCAGCAGAGGAGTCTAATGCAAATTGTCTAGTAGTTGATGAAACTGAACAAGAGAGCATTGTACAATCTAAAAACATTGATGAGTTATCTCCCCCAAATGGTTCTACTTCTTCCGACAGCCATAGATCTCCAAAATCAGAATTGGGACTCCAAGAAGTGGAGAAAAATGCATTGGGAGAAGTTGAAACTGCTTCTGGCTCTCATTCTGTTACTATTGATACTGAACGGAATGATGAACAAGTTGGCAAGTCAGTATCAGATGACAGGGTAGATGAGAGTCAACAAAGCCCTGCACATGAAGATATTAGTAATACAAGTGAGGTAGTGGAACCTCAAACAGAAACTTCAAGTAAAGGTGACCAAAGCCATTTGGGTTTGGGATTTGAGATCTCGCTTTGTGGTCATGAACTTAAGGCGGGTATGGGTTTGGTAGCTGCTGCTGAAGTGTTTGAAGCACATCGGATATCGGCAGTGGACTTTACAAGTTCTGCACCATCACTAATTAAGAATCAAAATCTTGTTATCAAGTATAAAGAGAGGTACTTGGTGTGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGGCTGTATTTGGTTTAGATTTACCTGTTGAGCCCAAAGATACAATTCCCGTGGAACAGGATGATGCACTGAAGTCCCGGGATGATGATCCTGGATCATCTTCGTCCGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAAGGTCAAGACAATTGAACACACTAATAGCACCTCATCAAATGAGGAGGTATTTCTAGATTCCGAGTCTGGATTTCTTGTAGAGCCAAGTCCAACATCCAGTACCCAGGGAACTCCTTGTAAGCAATTTCTAAGGACAAATGTTCCTACTAATGAACAAATAGCATCCTTGAATCTTAAAGATGGTCAAAATTTGGTAACCTTCAGCTTCTCTACAAGGGTTCTTGGAACACAACAGGTTGACGCTCATATATACTTATGGAAGTGGAATGCAAGAATTGTGATTTCAGACGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGCCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTATTGTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACCAGGAACTTCTTACTTAACCTGAAACAGGATGGAAAAACCTTACCTAATGGACCCGTTGTTATTTCACCTGATGGATTATTTCCTTCACTTTACCGAGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTCTATGCGGGATTTGGCAATAGAGACACAGATGAACTTAGTTACAGGAAGATTGGAATCCCCAAGGGCAAAATATTTATCATTAACCCTAAGGGTGAGGTGGCTATTAGTCACCGAATTGGTGCAAAGTCATACACATCATTACATACCCTTGTCAATGACATGTTTCCTCCTACTTCCTTGGTCGAGCAGGAGGACTTCAACTCATGGAATTATTGGAAAATGCCTTTGCCAGATGTTGAGTAA 2658 0.4157 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKVVRINVNGVEANFHMYLDNSGEAYFVREVDDDKGVESNGGNKNNIYLSNGHRLDHSVSDSGVLQLKDEGDSPVVPRIQRTESDGRYYEFQDDRSSFGDSVELSEYESNSYESQEGENFVDSQGSHPEVVLVSVDGHVLTAPILESEQNEENVQLRNPQFHLGPGEETDLCEGNEEFSSGESAWAADYISKLDAPTAEVQPKRCKTNGDDNTSRLKLEVCQREEVSNCQVQETLENKNQEDLHVKTDTEGVVSGINRENVFQSCLELQEFAQQAGNADLRDGGSSLEVQNSAEESNANCLVVDETEQESIVQSKNIDELSPPNGSTSSDSHRSPKSELGLQEVEKNALGEVETASGSHSVTIDTERNDEQVGKSVSDDRVDESQQSPAHEDISNTSEVVEPQTETSSKGDQSHLGLGFEISLCGHELKAGMGLVAAAEVFEAHRISAVDFTSSAPSLIKNQNLVIKYKERYLVWEKAAPLVLGMAVFGLDLPVEPKDTIPVEQDDALKSRDDDPGSSSSGRRWRLWPIPFRKVKTIEHTNSTSSNEEVFLDSESGFLVEPSPTSSTQGTPCKQFLRTNVPTNEQIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWKMPLPDVE* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01107 885 MobiDBLite consensus disorder prediction 366 399 - -
Rops6g01107 885 SMART lns2 685 841 IPR031315 -
Rops6g01107 885 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Rops6g01107 885 MobiDBLite consensus disorder prediction 411 473 - -
Rops6g01107 885 MobiDBLite consensus disorder prediction 366 395 - -
Rops6g01107 885 MobiDBLite consensus disorder prediction 561 579 - -
Rops6g01107 885 SUPERFAMILY HAD-like 677 827 IPR036412 -
Rops6g01107 885 MobiDBLite consensus disorder prediction 423 447 - -
Rops6g01107 885 MobiDBLite consensus disorder prediction 448 473 - -
Rops6g01107 885 MobiDBLite consensus disorder prediction 561 582 - -
Rops6g01107 885 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 479 587 IPR031703 -
Rops6g01107 885 PANTHER LIPIN 1 885 IPR026058 -
Rops6g01107 885 Pfam LNS2 (Lipin/Ned1/Smp2) 639 861 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01107 Rops-Chr6 25579360 25586824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01107 K15728 - gmx:100795884 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01107 6 25579360 25586824 Rops6g01107 6 25579360 25586824 ECH
Rops8g03236 8 70854732 70862889 Rops6g01107 6 25579360 25586824 PCT