Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03185 ATGGAGGAAGCGTTGGAACTGGCACGTGCGAAGGACACGAAAGAGAGGATGGCTGGTGTGGAGCGTCTCTACCAACTTCTAGAAGCTTCTAGAAAGAGTCTCACCTCTTCTGAAGTCACTACACTCGTCGATTCTTGTCTCGATCTCTTGAAGGATAACAACTTCCGAGTCTCTCAGGGCGCACTTCAGGCACTCGCTTCCGCCGCCGTTCTCTCCGGCGACCACTTCAAGCTTCACTTCAACGCTCTCCTTCCCGCCGTCGTCGACCGCCTCGGTGACTCTAAACAGCCCGTTCGCGACGCTGCACGACGACTCTTACTCACACTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACACAAAAGCTGGAGAGTCAGAGAGGAGTTTACACGAACTGTCACATCTGCAATTAACCTATTTGCATCTACCGAGCTTCCGCTTCAACGGGCTATCCTTCCTCCTGTTTTGCACTTGCTGAATGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGGCCTCAATTTCGTGATGAACTTCACCGTCACAATCTTCCTTCATCTTTGATGAAAGATATTAATGCCAGGCTAGAGGGAATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTGGTTATATTACTGGGGAAATGAGGCCTTTGAATGTTAATCCCAAGAAAAGTAGTCCAAAGGCCAAAAGTTCATCAAGGGAGAGCTCTCTTTTTGGAGGAGAAGGTGATGTCTCTGAGAAACCCATAGACCCTATCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGTCTTGCTGCTATGAAGAGGGTTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTTCGTGGACTCCTGAAGCAACTTGCTGGACCTTTAAGTACACAATTGTCAGACCGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCCGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGCGTGCTTCCCCGTATAGCCGACTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCGGATGCACCAGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAATGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTATTGCAAGGATGTGCTACAGAACGTTTGCAAAAACATGGCCAGAGCGTTCTCGTCGCGTATTTTCATCCTTTGACTCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACATAGACGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGATGTCATTACCCAATCAAACCTCTGCTTCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACTTCTATTTCCTCTGGTGTACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGGACAGAACGAAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCAGTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTTGTCTTCTCTCCGGTCATCAAGTTTGGACCTAGAAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCTGCTGTCCCCGCATCTAATCATCTGACAAGCTCTTTGACAACAGGATCAACTGCTTCTGGTGTCAATAAAGGTAGTAACCGAAATGGTGGTCTGGGTTTGTCCGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTTCCAAGTTATCATATCAAAGTAGTGTTGGTATTGAGCCTTTATCATCATTATCATCATATTCAACTAAAAGGCCTTCTGAAAGATTACAAGAAAGAAGTTCTGTTGATGACAACAGTGACATGAGGGAGGCTAGGCGATTTATGAACCACAACACTGATAAGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTATCTCTTGGAGAGATGTCAAGTTATGCAGATGGACCGGCATCTCTTCAGGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCAAGGGTTGCTGCCTTCAACTATCTTCACTCTTTGTTGCAGCAAGGTTCGAAGGGAATTCTAGAAGTTGTACAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAGCTTGTCAGGCAGCCATGTTCCACAACTTTGGAAGTTGTTAGCAAAACTTACAGTATTGATTCTCTCTTACCTGCATTGTTACGCTCACTAGATGAACAAAGGTCTCCGAAGGCTAAACTGGCTGTTATTGAATTCGCAATCAGTTCCTTTAACAAAAATGCAATGAATGCAGAAGGTGCTGCTAATATTGGTATCCTAAAATTATGGCTTGCTAAGTTAACCCCATTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAACTGCAGTTCTTAATTTCATTCTTAGTTTGTCAGTTGAAGATCAAAATTCTTTGAGACGAGCTCTTAAACAGTATACCCCTCGCATTGAAGTGGACCTAATAAACTACCTGCAGAACAAGAAAGAGCGACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGGTATTCCGCTGGTTCCCTAGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAGCTCTGATGAAAGGCAGTTTTGGTCAAGCAACTTCTGTTGAAACTCTGGAACATCCTAATCATAATCTTGAGACTGATTCTAATAGTGGCAGTCTTGGTTCAAAAACTAAAGATCTTGCTTATTCAGTCAACCCAATGAGTCAAAACTTTGGCTCTCATACTTGCCAGCTTGGACATGTGGATAGTAGCATGAACTTTGAGGGTCTTTCAACACCTCGTCTAGATGTTAATGGTCTGATATCATTAGAGCATTTGAATGTTGCTGAAGGCTATGTGCATGACAAAGAACATCCTTCTGAATTGGAACTTAATCATCACTCGGCTGAAGCTGTAAAGATTAACTCCATGACAAACACTGGACCCAGCATTCCTCAAATTCTTCATGTGGTATGCAGCGGGGGTGATGGAAGCCCTATTTCAAGCAAACGAACTGCACTTCAACAGTTAGTTGAAGCTTCTATAACAAACGACCATTCTGTTTGGACCAAGTATTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCTTATGTCAGAGAGCTTGCTCTTTCGTTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCTAAGGTCTCAAATGAAGCAGAACACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTTCCGAGGATGAGAAAACACTTGTCACGTGCATAAATTGCTTAACAAAGCTCGTGGGCAGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCATTTTTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGTAAGACTGTTGTTTTCTGTCTCGTGGATATATATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGCCTTAACAGCACACAATTGAAGCTGGTCACCATTTATGCGAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATGCCATTCATGATTCGTAG 4344 0.4279 MEEALELARAKDTKERMAGVERLYQLLEASRKSLTSSEVTTLVDSCLDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALLPAVVDRLGDSKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTSAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLMKDINARLEGIQPKVRSSDGIPSGYITGEMRPLNVNPKKSSPKAKSSSRESSLFGGEGDVSEKPIDPIKVYSDKELIREIEKIASTLVPEKDWSIRLAAMKRVEGLVLGGAADYPCFRGLLKQLAGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSIARMCYRTFAKTWPERSRRVFSSFDSVIQRLINEEDGGIHRRHASPSIRDRGALMSLPNQTSASSNLPGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERSLESVLHASKQKVSAIESMLRGLDLSDKHNLSSLRSSSLDLEVDPPSSRDPPFPAAVPASNHLTSSLTTGSTASGVNKGSNRNGGLGLSDIITQIQASKDSSKLSYQSSVGIEPLSSLSSYSTKRPSERLQERSSVDDNSDMREARRFMNHNTDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEMSSYADGPASLQEALSEGLSSGSDWSARVAAFNYLHSLLQQGSKGILEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKNAMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEDQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSLDSDGGRKWSSQDSALMKGSFGQATSVETLEHPNHNLETDSNSGSLGSKTKDLAYSVNPMSQNFGSHTCQLGHVDSSMNFEGLSTPRLDVNGLISLEHLNVAEGYVHDKEHPSELELNHHSAEAVKINSMTNTGPSIPQILHVVCSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSYVRELALSLIVEMLKNQKDAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAIHDS* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03185 1447 FunFam Protein peg1 266 513 - -
Rops8g03185 1447 SMART TOG_3 1202 1438 IPR034085 -
Rops8g03185 1447 SMART TOG_3 784 1026 IPR034085 -
Rops8g03185 1447 SMART TOG_3 3 224 IPR034085 -
Rops8g03185 1447 SMART TOG_3 282 514 IPR034085 -
Rops8g03185 1447 Gene3D - 1229 1438 IPR011989 -
Rops8g03185 1447 Gene3D - 1 221 IPR011989 -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 702 718 - -
Rops8g03185 1447 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 1107 1127 - -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 635 659 - -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 246 261 - -
Rops8g03185 1447 Gene3D - 796 1021 IPR011989 -
Rops8g03185 1447 Gene3D - 266 506 IPR011989 -
Rops8g03185 1447 Coils Coil 1282 1302 - -
Rops8g03185 1447 PANTHER CLASP 32 1432 - -
Rops8g03185 1447 SUPERFAMILY ARM repeat 5 402 IPR016024 -
Rops8g03185 1447 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Rops8g03185 1447 SUPERFAMILY ARM repeat 289 1436 IPR016024 -
Rops8g03185 1447 Pfam CLASP N terminal 284 500 IPR024395 -
Rops8g03185 1447 Pfam CLASP N terminal 804 997 IPR024395 -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 219 267 - -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 613 659 - -
Rops8g03185 1447 MobiDBLite consensus disorder prediction 692 718 - -
Rops8g03185 1447 Coils Coil 10 30 - -
Rops8g03185 1447 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03185 Rops-Chr8 69951034 69965954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03185 K16578 - gmx:100820523 2533.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03185 8 69951034 69965954 Rops8g03185 8 69951034 69965954 ECH
Rops8g03185 8 69951034 69965954 Rops6g01154 6 26252859 26271036 PCT