Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01154 ATGGAGGAAGCGCTGGAACTCGTGCGTGCCAAGGACGCTAAGGAAAGAATGGCAGGAGTGGAGCGTCTCCATCAAGTTCTGGAAGCTTCTAGAAGAAGCCTCAGTTCCAGTGAAGTCACTTCTCTCGTCGATTGTTGCTTGGATCTCTTAAAGGACAGTAGCTTCAGAGTCTCCCAAGGCGCTCTTCAAGCCTTGGCCTCCGCCGCCGTTCTCTCCGGCGACCACTTCAAGCTTCACTTCAACGCGCTTGTTCCCGCCGTCGTTGGACGATTAGGCGACGCCAAACAACCCGTTCGCGATGCCGCTAGAAGGCTCTTGCTCACTCTCATGGAGGTTTCATCTCCTACAATTATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACATGCAAGAGCTGGAGAGTCAGAGAGGAGTTTGCACGAACAGTCACATCTGCAATTGGTCTATTTTCATCGACTGAACTTACCCTTCAACGGGCCATTCTTCCTCCTATTTTGCAGTTGCTGAGTGATCCAAATCCTGCTGCCAGAGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCGGGGTCTCAATTTCGTGATGAGCTTCAGCGCTACAATATTCCTTCATCTTTGGTGAAAGCTATTAATGCCAGGCTAGAGGGGATTCAACCAAAAGTTCACTCTTCAGATTGTATTTCTAGTGGTTATATTGCTGGGGAAATTAATCCTTTGAGTGTTAATCCCAAGAAGAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGTCCTCTCTTTTTGGAGGAGAAGGTGATGTTACAGAGAAAGCCATGGATCCTATCAAGGTGTATTCAGAGAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGTTGATTATCCATGTTTTGGTGGACTCCTGAAGCAGCTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCGTTGTGAAGCAGGTTTGCCATCTATTATGCTTTTTGTCAAAGGACCTTTTGGGTGATTTTGAAGTGTGTGCTGAAATGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCGGATAACTGCATAAAAACGATGCTGCGTAACTGCAAAGTTGCTCGTGTGCTTCCCCGGATAGCTGATTGTGCAAAAAATGATCGTAGTGCAATACTTCGTGCTAGGTGTTGTGATTATGCTCTTCTGATACTAGAACACTGGCCTGATGCACCAGAAATACAGCGATCAGCTGATTTATATGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGCGAGGTGCGATCGACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGACCGTTCCCGTCGCCTATTTTCATCCTTTGACCCTTCTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAAAACATAGGCGACATGCATCACCTAGCATTCGTGATAGAAGTGCACTGATGTCATTAACTAGTCAAGCTTCGGCTCCATCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACAGAAGCTCAAGTTTATCATCAGGGACTTCTATCTCCTCTGGTGTTCTTCTTTCACAAGCTAAGTCACTTGGCAAAGGTACGGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAAGTCACTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGATAAGCATAATTCATCTGCTCTCCGGTCTACAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTTTCAGCATCCAGTCTGACTAGCACTTTAACGACAGAATCAACTGCTTATGGTGTCAATAAAGGTAGTATCCGGAATGGTGGTTTGGGTTTGTCTGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCATATAATAGTAGTGTTGGTATTGAGCCTTTATCAGCTTTTTCATCATACTCAAGTAAAAGGGCTTCTGAAAAATTACAAGAAAGAAGTTCTTTTGATGAAAACAGTGACATCAGGGATACTAGACGATTTATGAACCCCAACATAGATAGGCAGTATATGGATACCCCTGGCAACTTCAGAGATTCACATAATAGTTATGTGCCTAATTTCCAGAGGCCATTATTGAGAAAGAATGTAGCTGCACGTGTGTCTGCTGGCAGGAGGAGTTTTGATGATAGTCAATTATCTCTTGGAGAGATGTCAAATTATGCAGTTGGACCGGCATCTCTTCATGAAGCTCTGAGTGAAGGACTTAGTTCTGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAGTTATCTTCAGTCTTTGTTGCAGCAAGGTCAAAAGGGGATTCAAGAAGTTGTCCAGAACTTTGAGAAGGTAATGAAATTATTTTTTCAGCACTTGGATGATCCCCATCATAAAGTTGCGCAGGCTGCTCTTTCCACCCTTGCAGAAATCATTCTTACATGCCGAAAGCCCTTTGAGGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGATTAATTGACCCCAAGGAGCTTGTTAGGCAAGCATGCTCTACAACTTTGGAAGTTGTTAGCAAAACATATAGTATAGATTCTCTCTTACCTGCATTGCTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTTAACAAGCATGCTATGAATCCAGAAGGTGCTGCTAATGTCGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTACTCTCACTATGATTCATCAGCAGTTTTGAATTTTATACTTAGTTTGTCTGTTGATGAACAAAATTCTTTTAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTGATGAACTATCTGCAGAACAAGAAAGAGCGACGTTCCAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCCGAAGAGGGATATGCTGGTTTGTCAAGGAAAGCTCATTACATTGGAAGGTATTCTGCTGGTTCTCTAGATAGTGATGGTGGCAGGAAGTGGAGTTCCCAAGATTCAACCCTGATTAAAGCCAGTCTTGGCCAACCAGCTTCTGATGAAACTGAGGAATATTCATATAGGAATCTTCAGACTGATTCTAATAGTGGTATTCTTGGTTCAAAAACTAAAGATCTTGGTTACCCAGTGAACTCAGTGGATCAAAATTTTGGCTTTCAAACTAGCCAACTTGGACACGTGGACAGTAGCATGAACTTTGTTGAAGGTCTGTCATCTGATCTTGATGTTAATGGTCGGTCGTCATTAGAACATTTAAATATTGCCGAAGGCTTTGGACATGACAAAGAACATACTTCTTCTGAATTGAACCATAATCATCCCTCTGCTGAAGATGTGAAGGTTAACTCCATGCCAGACTCTGACCCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCTCTATTTCAAGTAAGCAGACTGCAATTCTACAGCTAGTTGAAGCTTCTATAGCAAATGATCATGCTGTTTGGACCCAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCGATCAGGGAGCTCGCTCTTTCATTGGTAGTTGAAATGCTTAAAAATCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTAATTGAAAGGCTGCTTAATGTTACAAAGGATATTGTAACCAAGGTCTCAAATGAAGCGGAGCACTGCCTGACCATTGTTTTATCTCAGCACGATCCCGTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTCACGGAGGATGAGAAAACTCTTGTCACTTGCATAAATTGCTTGACAAAGCTTGTGGGACGGCTCTCTCAGGAAGAACTGATGGCTCAGTTACCCTCATTTCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAAAGTGCGGATGTTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCGTATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTACGCCAACCGAATCTCACAGGCGAGGACAGGAAAATCAATTGATGCTGCTCACGATTAG 4326 0.4302 MEEALELVRAKDAKERMAGVERLHQVLEASRRSLSSSEVTSLVDCCLDLLKDSSFRVSQGALQALASAAVLSGDHFKLHFNALVPAVVGRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKSWRVREEFARTVTSAIGLFSSTELTLQRAILPPILQLLSDPNPAAREAAILCIEEMYAQAGSQFRDELQRYNIPSSLVKAINARLEGIQPKVHSSDCISSGYIAGEINPLSVNPKKSSPKAKSSSRESSLFGGEGDVTEKAMDPIKVYSEKELIREIEKIASTLVPEKDWSIRIAAMQRIEGLVLGGAVDYPCFGGLLKQLVGPLSTQLSDRRSSVVKQVCHLLCFLSKDLLGDFEVCAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPDRSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSALMSLTSQASAPSNLTGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSTSLDLGVDPPSSRDPPFPAAVSASSLTSTLTTESTAYGVNKGSIRNGGLGLSDIITQIQASKDSGKLSYNSSVGIEPLSAFSSYSSKRASEKLQERSSFDENSDIRDTRRFMNPNIDRQYMDTPGNFRDSHNSYVPNFQRPLLRKNVAARVSAGRRSFDDSQLSLGEMSNYAVGPASLHEALSEGLSSGSDWSARVAAFSYLQSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLAEIILTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANVGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHYDSSAVLNFILSLSVDEQNSFRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDPSDVVGTSSEEGYAGLSRKAHYIGRYSAGSLDSDGGRKWSSQDSTLIKASLGQPASDETEEYSYRNLQTDSNSGILGSKTKDLGYPVNSVDQNFGFQTSQLGHVDSSMNFVEGLSSDLDVNGRSSLEHLNIAEGFGHDKEHTSSELNHNHPSAEDVKVNSMPDSDPSIPQILHMICSGGDGSSISSKQTAILQLVEASIANDHAVWTQYFNQILTVVLEVLDDSDSSIRELALSLVVEMLKNQKDAMENSVEIVIERLLNVTKDIVTKVSNEAEHCLTIVLSQHDPVRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKSIDAAHD* 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01154 1441 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Rops6g01154 1441 SUPERFAMILY ARM repeat 289 1431 IPR016024 -
Rops6g01154 1441 PANTHER CLASP 32 1427 - -
Rops6g01154 1441 Gene3D - 267 509 IPR011989 -
Rops6g01154 1441 Coils Coil 1277 1297 - -
Rops6g01154 1441 Gene3D - 1222 1433 IPR011989 -
Rops6g01154 1441 Gene3D - 1 224 IPR011989 -
Rops6g01154 1441 MobiDBLite consensus disorder prediction 243 261 - -
Rops6g01154 1441 MobiDBLite consensus disorder prediction 243 266 - -
Rops6g01154 1441 Pfam CLASP N terminal 284 500 IPR024395 -
Rops6g01154 1441 Pfam CLASP N terminal 798 992 IPR024395 -
Rops6g01154 1441 SUPERFAMILY ARM repeat 6 402 IPR016024 -
Rops6g01154 1441 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Rops6g01154 1441 MobiDBLite consensus disorder prediction 612 637 - -
Rops6g01154 1441 MobiDBLite consensus disorder prediction 1178 1200 - -
Rops6g01154 1441 Gene3D - 792 1016 IPR011989 -
Rops6g01154 1441 FunFam Protein peg1 266 513 - -
Rops6g01154 1441 Coils Coil 10 30 - -
Rops6g01154 1441 SMART TOG_3 270 514 IPR034085 -
Rops6g01154 1441 SMART TOG_3 1185 1433 IPR034085 -
Rops6g01154 1441 SMART TOG_3 776 1024 IPR034085 -
Rops6g01154 1441 SMART TOG_3 3 224 IPR034085 -
Rops6g01154 1441 MobiDBLite consensus disorder prediction 1178 1192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01154 Rops-Chr6 26252859 26271036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01154 K16578 - gmx:100801377 2385.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01154 6 26252859 26271036 Rops6g01154 6 26252859 26271036 ECH
Rops8g03185 8 69951034 69965954 Rops6g01154 6 26252859 26271036 PCT