Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03169 ATGGCTTCAGATTCCAATTCAAATCTTAGAATCATCATTGAAAGAAATCCTTCACAGTCACGCCTAGCTGAATTGAACATCAATTGTTGGCCCAAATGGGGTTGTTCTCCTGGAAAGTACCAGTTAAAGTTTGATGCAGAAGAGACATGCTATTTGTTAAAAGGGAAGGTGAAAGCATACCCAAAAGGGTCATCAGAGTTTGTAGAATTTGGAGCTGGAGACCTTGTCACCATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGTTGCTGTGGACAAGTACTACAAATTTGAATCTTCTTCTTCTTCTGCTTCATCATCACCATCTTGTTAA 336 0.4018 MASDSNSNLRIIIERNPSQSRLAELNINCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSASSSPSC* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03169 111 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
Rops8g03169 111 Pfam EutQ-like cupin domain 24 96 IPR008579 -
Rops8g03169 111 PANTHER OS04G0445200 PROTEIN 5 99 - -
Rops8g03169 111 CDD cupin_TM1112-like 30 98 - -
Rops8g03169 111 Gene3D Jelly Rolls 2 98 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03169 Rops-Chr8 69730405 69731047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03169 - - gmx:100793722 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03169 8 69730405 69731047 Rops8g03169 8 69730405 69731047 ECH
Rops8g03169 8 69730405 69731047 Rops6g01174 6 26489887 26490749 PCT