Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01174 ATGGCTGAAGATTCCAATTCAAACCTTAGAATCACCATTGAAAGCAATCCTCCTGAGTCACGCCTAGCAGAATTGAATATCAAGTGCTGGCCCAAATGGGGTTGTTCTCCAGGGAAGTACCAGTTAAAGTTTGATGCAGAAGAGACATGCTATTTGTTAAAAGGGAAAGTGAAGGCATACGCAAAAGGATCATCAGAGTTTGTAGAGTTTGGTGCTGGAGACCTTGTGACAATTCCAAAAGGGCTAAGTTGCACCTGGGATGTTTCTGTTGCTGTGGATAAGCACTATAAATTTGAGTCGTTTTCTTCATCAACATCATCATTATCTTCTTAG 333 0.4114 MAEDSNSNLRITIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYAKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKHYKFESFSSSTSSLSS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01174 110 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Rops6g01174 110 Gene3D Jelly Rolls 2 98 IPR014710 -
Rops6g01174 110 PANTHER OS04G0445200 PROTEIN 6 99 - -
Rops6g01174 110 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
Rops6g01174 110 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01174 Rops-Chr6 26489887 26490749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01174 - - gmx:100500522 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01174 6 26489887 26490749 Rops6g01174 6 26489887 26490749 ECH
Rops8g03169 8 69730405 69731047 Rops6g01174 6 26489887 26490749 PCT