Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03145 ATGGGCATGTTCAGACGAAAACACTACACGCTCCTCTTTCTTTTTCTGGTGAGAGTTTTTGTGCTTGTTCTTGGTGCTACTGTTGCTTCAGCTGCAGATAACACAAACTTAGTATACAAGGGTTGTGCTGAACAGAAACTGGAAGGAACAAACTCAGATAATCTGAAATCACTGTTATCTTCTCTGGTATCAGCTTCTGCTCAGAAGCCTTTCGCCGCCACAACCGCCGGTAGCGCGATCACCGGTGCGTACCAATGCAGAGGGGACCTAACAAACTCCGATTGCTACGCCTGCATCAGCAAGATTCCAAACATGCTCGACCACCTCTGTGGTGACGTGGCAGCTGCAAGGGTCCAGCTCAGCGGCTGCTACCTGAGGTACGAGGTTGTCGGGTTCAAGCAGGTACCTCAGACTCAGCTGCTATACAAGGTTTGCGGCTCCAAGAAGATTGCTGATGGCGGCGGCTTCGAGGCAAGGAGGGACTCGGCGTTTGAAATGGTGGAGAATGGTGTGAAGAGTGGTGGGAGCTTGTTTTACACTGGGAGTTACCAATCTCTCTATGTGTTGGGACAGTGTGAGGGTGATTTGGGGAATGATGATTGTGTTGCTTGTGTTAAGAGTGCTGAAGAACAAGCCAAAGCTGAGTGTGGTGATTCAATTTCTGCACAAGTTTATCTCTATGGTTGCTTTATTAGTTATAGCTTTTATCCCAATGGAGTTCCCAGCATGTCATCTTCACCAGGAGGCAACAAAGGAGAAATTGAAGGTCCAAAATCCAAAATTCAGAGTGTATCCAAATCCATCTAA 807 0.4758 MGMFRRKHYTLLFLFLVRVFVLVLGATVASAADNTNLVYKGCAEQKLEGTNSDNLKSLLSSLVSASAQKPFAATTAGSAITGAYQCRGDLTNSDCYACISKIPNMLDHLCGDVAAARVQLSGCYLRYEVVGFKQVPQTQLLYKVCGSKKIADGGGFEARRDSAFEMVENGVKSGGSLFYTGSYQSLYVLGQCEGDLGNDDCVACVKSAEEQAKAECGDSISAQVYLYGCFISYSFYPNGVPSMSSSPGGNKGEIEGPKSKIQSVSKSI* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03145 268 FunFam cysteine-rich repeat secretory protein 3 34 132 - -
Rops8g03145 268 ProSiteProfiles Gnk2-homologous domain profile. 33 132 IPR002902 -
Rops8g03145 268 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 250 - -
Rops8g03145 268 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Rops8g03145 268 FunFam cysteine-rich repeat secretory protein 3 138 237 - -
Rops8g03145 268 MobiDBLite consensus disorder prediction 244 268 - -
Rops8g03145 268 Pfam Salt stress response/antifungal 49 128 IPR002902 -
Rops8g03145 268 Pfam Salt stress response/antifungal 149 235 IPR002902 -
Rops8g03145 268 Gene3D - 137 237 IPR038408 -
Rops8g03145 268 Gene3D - 33 132 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03145 Rops-Chr8 69346611 69348839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03145 5 234 Receptor kinase-like Gene Family AT5G40380 23.868 3.18e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03145 - - gmx:100786830 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03145 8 69346611 69348839 Rops8g03145 8 69346611 69348839 ECH
Rops8g03145 8 69346611 69348839 Rops6g01190 6 26701223 26702727 PCT