Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01190 ATGGGCATGATCAGAAAACGTTACTCTCATCTCTCTCCTTTTCTCTTAGCTGTTTCATGGCTCCTTCTTCATCCAACTTCAGAAGCAGACAACACAAAGTTGGTTTACAAGGGCTGTGCAGAACAGAAACTGCAAGACCCATCTGGGATATACTCACAGAACCTCAAAGCTTTGTTGGTTTCTCTGGTGGCACAATCTGGACAAAAAACCTTTTACACCACACACTCTGGTGATGGCCAGAATGTGATGATGGGTATGTACCAATGCAGAGGAGACATCTCAAACTCTGCTTGTTACAATTGTGTGAGCAAGATTCCTGATATGCTAGACAAGCTATGTGGCAAGGTGGTGGCGGCTGCAAGGGTCCAGCTTAGTTTGTGTTACCTGAGGTATGAGGTAGAGGGGTTCAAGCAGGTACCTGAGACTCAGTTGCTTTACAAGGCTTGTGGGTCCAAGCAGACGAGTGATGATGGGTTTGGGGAGAGAAGGGACTTGGTGTTTGGCATGGTGGAAAATGGAGTGAAAAATGGTGGGAAATTATTTTTCACTGGGAGTTATCAATCTCTCTATGTGTTGGGACAGTGTGAGGGTGATTTGGCCAGCAATGATTGTGGCGATTGTGTGAAGAGTGCTGAGGACCAGGCCAAAGCTGAGTGTGGTGACTCAAGTTCTGCACAAATTTATCTGCACAAGTGCTTTATCAGCTACAGCTTTTACCCCAAGGGATTATCCAGCATGTCATCTTCTCCAGGGTCAGTGGGGCAACAACACACGCAGAGGACCATAGCTCTTGCAGTGGGAGGGTTTGCAGCTCTGGGTTTCTTTATTGTTTGTTTGTTTTGTCTCAAGTCATTGTTCAAGAAAAGGGATGGTAAGTATTGA 882 0.4592 MGMIRKRYSHLSPFLLAVSWLLLHPTSEADNTKLVYKGCAEQKLQDPSGIYSQNLKALLVSLVAQSGQKTFYTTHSGDGQNVMMGMYQCRGDISNSACYNCVSKIPDMLDKLCGKVVAAARVQLSLCYLRYEVEGFKQVPETQLLYKACGSKQTSDDGFGERRDLVFGMVENGVKNGGKLFFTGSYQSLYVLGQCEGDLASNDCGDCVKSAEDQAKAECGDSSSAQIYLHKCFISYSFYPKGLSSMSSSPGSVGQQHTQRTIALAVGGFAALGFFIVCLFCLKSLFKKRDGKY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01190 293 Pfam Salt stress response/antifungal 179 238 IPR002902 -
Rops6g01190 293 Pfam Salt stress response/antifungal 43 132 IPR002902 -
Rops6g01190 293 ProSiteProfiles Gnk2-homologous domain profile. 141 241 IPR002902 -
Rops6g01190 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 14 286 - -
Rops6g01190 293 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Rops6g01190 293 Gene3D - 141 240 IPR038408 -
Rops6g01190 293 Gene3D - 30 136 IPR038408 -
Rops6g01190 293 FunFam cysteine-rich repeat secretory protein 3 142 240 - -
Rops6g01190 293 FunFam cysteine-rich repeat secretory protein 3 31 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01190 Rops-Chr6 26701223 26702727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01190 27 211 Receptor kinase-like Gene Family AT4G23160 27.273 1.79e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01190 - - gmx:100795002 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01190 6 26701223 26702727 Rops6g01190 6 26701223 26702727 ECH
Rops8g03145 8 69346611 69348839 Rops6g01190 6 26701223 26702727 PCT