Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03118 ATGTCCAATGACAATAAGGTGAAGGGCCTCCTTAAAGGTCTAAGATTCATTTCTCAGATATTTGATAATAATGAAAAAGGAAAAGAACCAGAGATTCAGATTGGAAATCCCACAGATGTAAGGCATGTGGCGCATGTTGGATGGGATGGTCATGGTCCCTCTGAAAATCCTCCCAGCTGGATGAACGAGTTTAAATCTGTCCCAGGAAATTCACCTGCACCTCCAAATCCTAATGGAGACATTAATTGCAAAGGACAAGACAATTCAGTCAAACAGGTCTCTTCAGATTCAGCGAGAAATGGTTCAAGGTCTGTGAATTGTCAAGGTCAAGAGAGGGACTCATCCGAGTTGCCTAAATCATCTAAGAAGCATTCAAATTCAACAGCACACATGAGAGAGTCTCATGCAAAGGAAAGATCAGATAGGCCAAGGCAAACAAAAAAGTCATCCAAAAATTCACACTCAAATGATTCATTCCATGGATCCAAGCACAATGATGGTTCCACAGATTCTCTCCAACTACAAGGGAGTGATTTGCCACCAAAGAGCACATCAGACTCTCCTAAAAAACCTCGCTCCAAGAAGTCAAAAGATGGTTCCACTGGTGGCTCATCCAAATCAAGATCAAAAGGCTCACATAGGGAATCCAAATCCAATGAAGGATCCAGTTCCAAATCTAGGAACAGACAGAGGAGGTCCTGTGGAGAAGATGGACAACTTGAGAGAGGCTCTAATCCAGATATATTGATAAATTACTCAAATTAG 765 0.417 MSNDNKVKGLLKGLRFISQIFDNNEKGKEPEIQIGNPTDVRHVAHVGWDGHGPSENPPSWMNEFKSVPGNSPAPPNPNGDINCKGQDNSVKQVSSDSARNGSRSVNCQGQERDSSELPKSSKKHSNSTAHMRESHAKERSDRPRQTKKSSKNSHSNDSFHGSKHNDGSTDSLQLQGSDLPPKSTSDSPKKPRSKKSKDGSTGGSSKSRSKGSHRESKSNEGSSSKSRNRQRRSCGEDGQLERGSNPDILINYSN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03118 254 Gene3D CRIB domain 26 73 IPR036936 -
Rops8g03118 254 SMART PBD_5 34 67 IPR000095 -
Rops8g03118 254 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 226 IPR044510 -
Rops8g03118 254 MobiDBLite consensus disorder prediction 208 238 - -
Rops8g03118 254 MobiDBLite consensus disorder prediction 43 254 - -
Rops8g03118 254 MobiDBLite consensus disorder prediction 126 164 - -
Rops8g03118 254 MobiDBLite consensus disorder prediction 165 184 - -
Rops8g03118 254 MobiDBLite consensus disorder prediction 185 201 - -
Rops8g03118 254 MobiDBLite consensus disorder prediction 81 114 - -
Rops8g03118 254 CDD CRIB 32 66 - -
Rops8g03118 254 ProSiteProfiles CRIB domain profile. 34 47 IPR000095 -
Rops8g03118 254 Pfam P21-Rho-binding domain 33 66 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03118 Rops-Chr8 69082166 69083631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03118 - - cam:101493933 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03118 8 69082166 69083631 Rops6g01200 6 26850261 26852331 PCT