Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01200 ATGTCCAGCAACAAGGTGAAGGGTCTTCTTAAAGGCCTAAGATACATATCTCAGATGTTTGAAAATGAAAAAGAACAAGAAATACAAATTGGATATCCCACTGATGTAAAGCATGTGGCCCACATAGGATGGGATGGTCCCTCTGTAAATTCTCCCAGCTGGATGAACGAATTTCAAACTTCTCCAGGATTTGCATCAGCACCCTTAGGTCTTACAGGGGATGTTCAAAATAAAGGACAGGATAATTCAGTCAAATGGGTCTCCGAAGATTCAAGGAGAAGAAGTTCAAGGTATGTGAATTCCCAGGGTCAAGGGAGGGATTTACCTGATTTGCCAAAGGCATCTAGAAGGCAATTAATGGATAACACAACAGATTCTCCAACAAGGGAAAAGTCAAGGCAATCAAGGAAGTCATCCAACAAAAATTCACAACCCAAATATTCATCAGATGGATCCATACTGACCCAACAAGGAGATGGGTCACCAGCCCACAACCTATCAGACAATCCCAAGAAGACTCGTAGAAAGAAGTCCAAAGAAAATTCTAGTAGTGGTGGTGGGTCATCCAAAACCAGATCCAAAGCCCGATCTCCGGATCCAAGTATAGAATTTGGATCTCCACCCAAATCTCAATCCAAGTCTAGAAACAAGGAAAGGTCCTTTGAAGAAAATGAGCAGTATGAAAGAGAACTGAGTAGGATACCTTGA 708 0.4195 MSSNKVKGLLKGLRYISQMFENEKEQEIQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFQTSPGFASAPLGLTGDVQNKGQDNSVKWVSEDSRRRSSRYVNSQGQGRDLPDLPKASRRQLMDNTTDSPTREKSRQSRKSSNKNSQPKYSSDGSILTQQGDGSPAHNLSDNPKKTRRKKSKENSSSGGGSSKTRSKARSPDPSIEFGSPPKSQSKSRNKERSFEENEQYERELSRIP* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01200 235 SMART PBD_5 30 61 IPR000095 -
Rops6g01200 235 MobiDBLite consensus disorder prediction 65 235 - -
Rops6g01200 235 FunFam Elongation factor Ts, mitochondrial 23 68 - -
Rops6g01200 235 Coils Coil 210 230 - -
Rops6g01200 235 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Rops6g01200 235 MobiDBLite consensus disorder prediction 212 235 - -
Rops6g01200 235 Pfam P21-Rho-binding domain 29 78 IPR000095 -
Rops6g01200 235 CDD CRIB 28 61 - -
Rops6g01200 235 MobiDBLite consensus disorder prediction 123 137 - -
Rops6g01200 235 Gene3D CRIB domain 23 65 IPR036936 -
Rops6g01200 235 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 4 200 IPR044510 -
Rops6g01200 235 MobiDBLite consensus disorder prediction 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01200 Rops-Chr6 26850261 26852331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01200 - - psat:127092765 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01200 6 26850261 26852331 Rops6g01200 6 26850261 26852331 ECH
Rops8g03118 8 69082166 69083631 Rops6g01200 6 26850261 26852331 PCT