Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03114 ATGGTCCCTTCAATCCCAATATGCATTGACTCGCAATGGCAATGGACCCCTTTTGTTGGGAAGAGAGAGCTTTTCCATGGATCCTTTGCAAGTTTAGAAGATGCCTATCAGGCCCTAAGAGTTTTTGAGATTCTTGCTATTGAGCATAAGCCTGATGTGAGCACAACCACTTGTCAGAAAGTAGTGGAAAATCTTGGGTCATCTTCCCCTCTGAAGGATTTGTACGATGCCTTAAAAGTTAATGGCATATTAAAATGCAAGGTTAATGGGGATGTTTTAAGACTTAAAGCCACCGTCAATGATGCAAGTACTTTGGTTGACATATGCTATTCAATAGGAAGTTTGGTTCTTATAAAGGATCAAGCGTCTGATGTTGATGTGCTTCTTGCTGATGCTGATGGGACTTTCCATACAATCAAGGTCCATTTTTATTGGCTCCTGAAAAACGACCGCCCCAGAAACTCTCTCTCTCTCGACCCTTTTGCCATTCATTGGCTCTTTGGTTGGGCTATTAAGCGTGGGGGTGATCTTGAAGAATTTCCCTTCTTCTGCAGTACCTGCTACATATGCCATCCTATTCCATCTTGGCATTGCTGCAGTTCTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACGCTCAAAACATAGCTTATTCTAGCTCTCCGTGGCATTATGGGAGGCATAGCTTTTACCCCTTTTTAAACAACTCATGCTTTCATGGTCCAGATCGTGTATTCTCTACCTACCCTGTTCAGCAGCTACTAGGAGGCCCCGTATCTGGGACGGAACTAGGGAAAGGGAACTCATGGATTGAAACCGTATCATGTCAGCAGGGGAATTGGTACAAACACCAAGTGTGGCCCCTTCGTCTGTTCTTCTGTTTAGAAGATGCCTATCGGGCCTTAAGAGTTTTTGAGATTCTTGCGATTGAGAATAAGGCTGATGTGAGCGCAAGCACTTATCAGAAGGTGGTGGAAAATCTTGGGTTGTCGTCCCCTCTGAAGGATTTGTACTATGCCTTAAAGGATCAGGCGTCTGATGTTGATGTGTTTCTTGCTGATGCTGATGGGACTTTCCATACAATCAAGGCTTTGAGCCAAAGTGATGGAAGAAGGCGCTACAGTTCTGGTAATCTAGAGTCTAGTACCTATGTTGTTGCACTTGAAGCTATGGTTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCAGTCTAACGTAAAGTTCTGA 1242 0.4356 MVPSIPICIDSQWQWTPFVGKRELFHGSFASLEDAYQALRVFEILAIEHKPDVSTTTCQKVVENLGSSSPLKDLYDALKVNGILKCKVNGDVLRLKATVNDASTLVDICYSIGSLVLIKDQASDVDVLLADADGTFHTIKVHFYWLLKNDRPRNSLSLDPFAIHWLFGWAIKRGGDLEEFPFFCSTCYICHPIPSWHCCSSIALCTFLVEAGLVHYAQNIAYSSSPWHYGRHSFYPFLNNSCFHGPDRVFSTYPVQQLLGGPVSGTELGKGNSWIETVSCQQGNWYKHQVWPLRLFFCLEDAYRALRVFEILAIENKADVSASTYQKVVENLGLSSPLKDLYYALKDQASDVDVFLADADGTFHTIKALSQSDGRRRYSSGNLESSTYVVALEAMVGVISLASSEIDQSNVKF* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03114 413 Pfam Oligosaccharyltransferase subunit Ribophorin II 23 127 IPR008814 GO:0006487|GO:0008250|GO:0016020
Rops8g03114 413 PANTHER RIBOPHORIN II 23 138 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03114 Rops-Chr8 69015497 69032426 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03114 K12667 - gmx:100780415 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03114 8 69015497 69032426 Rops8g03114 8 69015497 69032426 ECH
Rops8g03114 8 69015497 69032426 Rops6g01213 6 26947230 26963524 PCT