Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01213 ATGATTGGAGTATCAACAAGAATGATTTTGAAAAATGTTGGCTCCAAGATAATATTTGAAAAGGAAAATGCAATGGATTCAGATGCTGCCCTTATCACCATCAAAACCTTAAAAAATAGCTATTTTGTTGGTGGTGGTTACGTTGCCTTGGAGTTTGCAGCTTCTTCTTCACTCTCCTTGGTTGGAGGTCCGACATGTACGGCTCGTCCGGTGGCACCAGCGTCCGTCAGCGTCGGAGCCAGGTCTGACATTCAAAGACGACATCCCAATCAGCGGCTTACCTCTGTCGGAGTAACTGAATCTTCAGATCTCAAAATTTCTCCCTATAGGTGTCTCTGCAAAGAAGACGGTGGCGCAGCAGCACCGACATGGCGATGGACTTCATCTGAAGGTCTTGTCTTGGAGGGTGTAGTTGCTCTCACATTTTCTTCAAAGCTCATTCACCATCTCCTTCACCGCCTCCGCCGTCATGCCCCAATCTCCACCGCCAAAATCTTCTCCGCCTCCACAAGGTTCACCACCACAAAAGGAATGGCCACAAACGCAGTAGGAGTAGCAGCATTTCTGCTACTGCTGCTTCTCCCTCTCTCGATCTCCCAAACCATCTCCGATTCTCACCGATCCGCTGCCTCCCAACTCTTCTCTCCCACCGATGGATCCTTTCATAGTTTACAAGATGCGTACGAGGCCCTTAGAGTTTTCGAGATTCTCGGAATCGAAAAGAAGCCTCCTTTGACCTCAGCCACTTGTCCCAAAGTGTTGGAAAATCTGGGGTCTTCTTCCCCTCTTAAGGATTTGTTTTATTATGCCTTGAAAGTTAATAGCATATTGAAATGCAACGTTGATGGGAAGGTTTTCAAGGATATTGCTTCGAGACTTAAAGCCACCGTCCACGACGCAAGTACTTTGCTTGACATATACTACTCAATTGGAAGTTTGGTTCTTATAAAGGATCAGGATTCTAATGTTGATGTGCTTCTTGATGATGCTGATGGGATTTTTAATTCAATCAAGACTCTAAGCCAAAGTGATGGAAGATGGCGCTACAGCTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTTGCTGGAGTGATTTCACTAGCATCTTATGAAATTGACCAGAGTAAGGTCAATATAGCGAAAAGTGATATAGTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGAACCTTTTATTTTGATGAGAAATTTGTTGGTGGACATGAGCATCAGGGTTCTCTTTCCACAACTTCTTCAGTTGTTCGAGGGGTTACAGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTAGCAAAATTTTTCCTGGGCATTGGAGTCCCAGGCGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTTTTCTAGAGAGCAACAGGATTTCCATCCCATTGATATTGTCACTTCCTGAAACAGTTTATTCATTGACCAAGAATGGCCAGCTTAAGGTTAGGGTGAATACGGTGCTTGGTTCAGCTGCCCCACCTCTGACAGTTAAGCTTGTCCGAGCTTTTAGCACTAGTGCAAAAGATTCAGCTATTATTGATGGCAAGGAGCTCCAGTATAACCAAAAAGGTGGATTTCATTTCTTGGATGCTTTCCCAAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTGTGCTTCATGATTCTGACAGTGAAAAAGCTTATGCTACTGGAGGCCAAATTCATGTGCCAATATATGTCACTGGAATTATTAAAATTGGCAATGCAGAAATTGCAGTTCTGGACAGTGATCTTGGAAGTGTTGAAACGCGGAAAACGCTAGATTTGGCTGGGAATGAAGTTGTTTCACTCTCAGCTAACCACCTGCAGAAGTTGAGGTTTTCTTTCCAATTGGAAACTCCTCATGGTCATGTTTTTAAGCCTCATCAGGCATTCTTAAAGTTGAGACATGAGACAAAGATTGAACACATCTTTTTGGTTGGAAATACTGGCAAGAAGTTTGAGATAATTCTTGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTCTCGGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCATACGGCTACTTGGCCATGTCGAATTAGATCTTCCAGAAGCACCTGAGAAAGCAGCACGTCCTTCTCCACCACCTGTTGATCCTTACTCAAGATATGGGCCCAAAGCAGAGATTACCCACATATTCAGGGCTCCTGAAAAGCGACCACCCCAGAATCTTTCTCTTGCTTTTTTGGGTTTGACCCTGTTGCCATTCATTGGCTTTTTGGTTGGGTTGTTACGTTTGGGGGTGAACCTAAAGAATTTCCCTGGTTCAACTGTACCTGCTACATTTGCCATCCTTTTCCATCTCGGTCTTGCTGCAGTTCTGTTGCTTTATATGTTTTTCTGGTTAAAGCTGGACCTGTTCACTACACTCAAAATACTTGGTTTTTTGGGAGCTTTCTTGATGTTTGTTGGACACAGAATTCTTTCCCATCTTGCTTCGACATCAGCCAAGTTGAAATCTGCATGA 2604 0.4328 MIGVSTRMILKNVGSKIIFEKENAMDSDAALITIKTLKNSYFVGGGYVALEFAASSSLSLVGGPTCTARPVAPASVSVGARSDIQRRHPNQRLTSVGVTESSDLKISPYRCLCKEDGGAAAPTWRWTSSEGLVLEGVVALTFSSKLIHHLLHRLRRHAPISTAKIFSASTRFTTTKGMATNAVGVAAFLLLLLLPLSISQTISDSHRSAASQLFSPTDGSFHSLQDAYEALRVFEILGIEKKPPLTSATCPKVLENLGSSSPLKDLFYYALKVNSILKCNVDGKVFKDIASRLKATVHDASTLLDIYYSIGSLVLIKDQDSNVDVLLDDADGIFNSIKTLSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASYEIDQSKVNIAKSDIVKLFDSIEKYDDGTFYFDEKFVGGHEHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLAKFFLGIGVPGDAKDFFNQVESLAFLESNRISIPLILSLPETVYSLTKNGQLKVRVNTVLGSAAPPLTVKLVRAFSTSAKDSAIIDGKELQYNQKGGFHFLDAFPKNVDVGTYVFVFEIVLHDSDSEKAYATGGQIHVPIYVTGIIKIGNAEIAVLDSDLGSVETRKTLDLAGNEVVSLSANHLQKLRFSFQLETPHGHVFKPHQAFLKLRHETKIEHIFLVGNTGKKFEIILDFLGLVEKLFYLSGRYDIELTVGDAVMENSFIRLLGHVELDLPEAPEKAARPSPPPVDPYSRYGPKAEITHIFRAPEKRPPQNLSLAFLGLTLLPFIGFLVGLLRLGVNLKNFPGSTVPATFAILFHLGLAAVLLLYMFFWLKLDLFTTLKILGFLGAFLMFVGHRILSHLASTSAKLKSA* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01213 867 PANTHER RIBOPHORIN II 188 866 IPR008814 GO:0006487|GO:0008250|GO:0016020
Rops6g01213 867 Pfam Oligosaccharyltransferase subunit Ribophorin II 189 859 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01213 Rops-Chr6 26947230 26963524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01213 K12667 - gmx:100814831 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01213 6 26947230 26963524 Rops6g01213 6 26947230 26963524 ECH
Rops8g03114 8 69015497 69032426 Rops6g01213 6 26947230 26963524 PCT