Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03105 ATGGATTCAATCCAAGAATTTATAGACACGTGTAAGTCTGAAAACACCTGCAGCAACCTCACCAATAACACCAGCATCACCAACGCCACCAACTTAGCTGCTGCAAGTGCTAGCGCTTCCTCATCTCCTTCCACCACCACCACCAGCCGCTATGAGAACCAGAAACGCCGTGACTGGAACACCTTTGGCCAGTACCTCAAGAATCACCGACCCCCTCTTTCCCTCTCTAGATGCAGCGGTGCACATGTCCTTGAATTTCTCAGGTACCTGGATCAATTTGGAAAGACGAAAGTGCACACACCGATCTGCCCCTTTTATGGGCACCCGAACCCTCCAGCTCCTTGTCCATGTCCACTTCGACAAGCTTGGGGAAGCCTTGATGCACTAATAGGTCGTCTTCGTGCAGCTTTTGAGGAAAATGGAGGAAAACCTGAAGCAAACCCTTTTGGAGCTCGAGCTGTGAGGCTTTACCTTCGTGAGGTTCGTGATCTTCAGTCCAAAGCAAGAGGGATTAGTTATGAGAAGAAGAAACGGAAGCGTCCACCACAGCAACAATCCATGCCACTACCTCCTCCAGGTGCAACTCATTAG 591 0.5008 MDSIQEFIDTCKSENTCSNLTNNTSITNATNLAAASASASSSPSTTTTSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQSMPLPPPGATH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03105 196 MobiDBLite consensus disorder prediction 35 50 - -
Rops8g03105 196 Pfam ALOG domain 39 163 IPR006936 -
Rops8g03105 196 MobiDBLite consensus disorder prediction 168 196 - -
Rops8g03105 196 PANTHER PROTEIN G1-LIKE2 31 185 IPR040222 -
Rops8g03105 196 MobiDBLite consensus disorder prediction 35 54 - -
Rops8g03105 196 ProSiteProfiles ALOG domain profile. 50 177 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03105 Rops-Chr8 68878451 68880339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03105 - - gmx:100527164 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03105 8 68878451 68880339 Rops8g03105 8 68878451 68880339 ECH
Rops8g03105 8 68878451 68880339 Rops8g04151 8 83564789 83566098 ECH
Rops8g03105 8 68878451 68880339 Rops6g01537 6 32123164 32124435 ECH
Rops6g01537 6 32123164 32124435 Rops8g03105 8 68878451 68880339 ECH
Rops8g03105 8 68878451 68880339 Rops6g00077 6 1841471 1843066 PCT
Rops6g01218 6 27064368 27065711 Rops8g03105 8 68878451 68880339 PCT