Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01537 ATGAATTCCCTTCAAGAATTTGACTCCTCATCAAACACAGACAACAAAGTCATCAACCTCAGTGAAGGGAACAGCTCCAATTTCACATCAGCACCTACCTCATCATCATCATCACCATCACCATCCACCACTCTGAGTCGCTATGAGAACCAGAAGAGGCGAGATTGGAACACTTTTGGACAGTACCTTAGAAACCACAGACCCCCACTTTCTCTTTCACGTTGTAGTGGTGCTCATGTCCTTGAATTCTTGAGGTACCTTGACCAGTTTGGGAAAACTAAGGTTCACACACAGGTTTGTCCCTTCTTTGGACACCCAAATCCACCTGCACCTTGCCCTTGTCCTTTAAGACAAGCATGGGGTAGCCTTGATGCACTCATAGGTCGCCTTAGAGCTGCTTTTGAAGAGAATGGAGGAAAGCCTGAAGCTAACCCTTTTGGTGCTCGTGCTGTGAGGCTTTATCTTCGTGAAGTGCGTGATTCACAAGCCAAAGCTAGAGGAATTAGCTACGAGAAAAAGAAGCGCAAGCGTCCCCAACCTCCTTCACTTCCACCATCAAATGCAACTTAA 570 0.4649 MNSLQEFDSSSNTDNKVINLSEGNSSNFTSAPTSSSSSPSPSTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQVCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQPPSLPPSNAT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01537 189 MobiDBLite consensus disorder prediction 161 178 - -
Rops6g01537 189 MobiDBLite consensus disorder prediction 161 189 - -
Rops6g01537 189 MobiDBLite consensus disorder prediction 1 47 - -
Rops6g01537 189 PANTHER PROTEIN G1-LIKE2 26 178 IPR040222 -
Rops6g01537 189 ProSiteProfiles ALOG domain profile. 47 174 IPR006936 -
Rops6g01537 189 MobiDBLite consensus disorder prediction 1 50 - -
Rops6g01537 189 Pfam ALOG domain 36 160 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01537 Rops-Chr6 32123164 32124435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01537 - - gmx:100806497 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01537 6 32123164 32124435 Rops6g01537 6 32123164 32124435 ECH
Rops6g01537 6 32123164 32124435 Rops8g04151 8 83564789 83566098 ECH
Rops8g03105 8 68878451 68880339 Rops6g01537 6 32123164 32124435 ECH
Rops6g01537 6 32123164 32124435 Rops8g03105 8 68878451 68880339 ECH