Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03097 ATGCCTATTCCGCAACGCACTAGGAAACGTGAAAACCTCACTTCCATCTCATCTCAAACTCCGAGCAGAGGAAGCTTTTGGGCTCGCCGGCGTGGTTGCAAGAACCTTTGCTTCTCTGATAATATTAAAATGGAGAAGAAAGAAGGTGCAGTGTTCTGGTTCGAAACCTCTCACTCTGTTTGTCTCCGACACCAGTTTCAACCCGATGGTCAACTCTCCGTAATGCTTGTTGATGATTCCAGACCCTTATACCAAAGGGTGGCTGGGTCTTTCTTGAATAAATTTTTCCCCTCTGGATATCCATACAGTGTGAATGAAGGCTATCTTAGATACACACAGTTTCGTGCAGTGCAACATGTTACTAGTGCAGTACTATCAGTGCTATCAACTCAGTCACTGCTGTTTGCTGCAGGGTTGCGGCCCACTCCTGCACAATCAACCGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGAGCCTAAACGCTGGAGACTACTTGCTGATGTGCTCTATGATTTAGGCACTGGCTTGGAAATGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAATGGCAGGCCTAGGAAATTTCGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTTTTTGCTAAAGGGGAGGCTTTTTCAACTCTGTTTAATGTTATTGGAATTGGAGTTGGAATTCAATTAGCTTCAACTATCTGTGCATCAATGCAGGGAAAGTTGGTTGCAGGTCCTCTCCTTTCAATTATACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATACCTTGAATCCACGAAGAACTGCGATGATCGTGGTTGATTTTCTAAAGGCAGGAATTGTATCAAGCCCTGCTGATCTAAGATACAGAGAAGATCTTCTCTTTCGTGTTCGACTCACAGAAGATGCTGGAAATGTAAGAGTAGGGAGGGCTTTGCATGAGGTTGTTAAGCCTTCCAAGCTTCTTGAATTAAAACAGGTATTTCCCAAGGAGAAGTTTCTTTTAAATGGTGGGGGTAAATGCATTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAAAGGGTGGCTAGTTGCTGCATATGCTGCACAAATTGAGAGTTCCTCTCATGAGCTCAGTGCTAGTGTCCTGCAAGAGGCCTATGAGAAAATGGATAGTGTCTTTCCTGTATTTTTAAGAGAATTACAGAACAAAGGGTGGCACACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG 1374 0.433 MPIPQRTRKRENLTSISSQTPSRGSFWARRRGCKNLCFSDNIKMEKKEGAVFWFETSHSVCLRHQFQPDGQLSVMLVDDSRPLYQRVAGSFLNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAVLSVLSTQSLLFAAGLRPTPAQSTAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDLGTGLEMLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASTICASMQGKLVAGPLLSIIHIYSVSEEMRATPINTLNPRRTAMIVVDFLKAGIVSSPADLRYREDLLFRVRLTEDAGNVRVGRALHEVVKPSKLLELKQVFPKEKFLLNGGGKCIDMVLEQDASGEDALKGWLVAAYAAQIESSSHELSASVLQEAYEKMDSVFPVFLRELQNKGWHTDRFLDGTGSRFAF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03097 457 PANTHER RUS1 FAMILY PROTEIN C16ORF58 47 456 IPR006968 -
Rops8g03097 457 Pfam Vitamin B6 photo-protection and homoeostasis 86 317 IPR006968 -
Rops8g03097 457 MobiDBLite consensus disorder prediction 8 24 - -
Rops8g03097 457 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03097 Rops-Chr8 68758442 68768046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03097 - - gmx:100820508 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03097 8 68758442 68768046 Rops8g03097 8 68758442 68768046 ECH
Rops8g03097 8 68758442 68768046 Rops6g01229 6 27203847 27208069 PCT