Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01229 ATGGATTTCCTGGAGAAGCTAAAATTTCGGAAGAAAAGGGCAGAAAAAGAAGGTGAAGGCCCTCCAGTGTTGTGGTTCGAAACCTCAGTCTCTGTTTGTCGTCGCTTCCAGTTTGAACCCAATGGCCAACTTTCCGTAAAACTTGTTGGTGATTCCAGACCGTTTTACCACAGGATAGTTGAGTCGTTCCTGAATAAATTTTTCCCCTCAGGATATCCATACAGCGTGAATGAAGGCTACCTCAGATTCACACAATTTCGAGCACTGCAACAAATTGCCAATGCAGCACTATCAGTGCTATCAACTCAGTCACTGCTATTTGCTGCAGGCTTGCGGCCCACTACTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGACGGTATGGAACATTTAGGGAGGCTAATATGTAGCAATTTGGGTGCAAGAATGGATTCAGAACCTAAAAGTTGGAGAATTCTAGGTGAAGTGCTCTATGATTTAGGCTCTGGCTTGGAAGTGCTTTCTCCATTATGTCCACATCTTTTTTTAGAAATGGCAGGCCTAGGCAATTTTGCCAAGGGGATGGCAGTTGTTGCAGCAAGAGCTACAAAATTACCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTATATGCTAAAGGGCATGCTATTTCAACTCTCTTTAATGTTGTTGGAATTGGAGTTGGAATTCAATTAGCGTCAACTGTATGTGCATCAATGCAGGGAAAGTTGCTTGTGGGGCCTCTACTTTCAATCATACATATATACTGCGTTTCTGAAGAAATAAGATCAGTTCCTGTCAATACCTTAAATCCACAAAGAACTGCAATCATTGTGGCTGATTTTCTCAAGGCAGGAAATGTATCAAGCCCTGCTGATCTAAGATATAGAGAAGGTTTGCTATTTCCTGGGAGGCTCATAGAAGATGCTGGAAATGTAAGAGTGGGTAGGGCTTTGCACAAGGTTATTAAGCCTTCAAGGCTTCTAGAACTAAAACAAGTGTTCCCTGAGGAGAAGTTTCTTTTAAAACGTGAAAACAGATGCATTGACATGGTGTTGGAGCAAGATGCTATTGGTGAAGATGCATTAAGAGGGTGGTTAGTTGCTGCATATGCTGTACAAATTGATAAGTCCTCTCATGAGCTCAGTGCTAATGTCTTGCTACAGGCCTATGAGAAAATGAATGAGGTCTTCCCTATGTTTTTAGAAGAATTACAGAATAAAGGGTGGCATACGGATAGTTTTTTGGATGGAAATGGGAGCCGTTTTGCATTATAG 1290 0.4147 MDFLEKLKFRKKRAEKEGEGPPVLWFETSVSVCRRFQFEPNGQLSVKLVGDSRPFYHRIVESFLNKFFPSGYPYSVNEGYLRFTQFRALQQIANAALSVLSTQSLLFAAGLRPTTAQATAVSWILKDGMEHLGRLICSNLGARMDSEPKSWRILGEVLYDLGSGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATKLPIYSSFAKEGNLSDLYAKGHAISTLFNVVGIGVGIQLASTVCASMQGKLLVGPLLSIIHIYCVSEEIRSVPVNTLNPQRTAIIVADFLKAGNVSSPADLRYREGLLFPGRLIEDAGNVRVGRALHKVIKPSRLLELKQVFPEEKFLLKRENRCIDMVLEQDAIGEDALRGWLVAAYAVQIDKSSHELSANVLLQAYEKMNEVFPMFLEELQNKGWHTDSFLDGNGSRFAL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01229 429 PANTHER RUS1 FAMILY PROTEIN C16ORF58 22 428 IPR006968 -
Rops6g01229 429 Pfam Vitamin B6 photo-protection and homoeostasis 58 289 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01229 Rops-Chr6 27203847 27208069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01229 - - gmx:100814176 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01229 6 27203847 27208069 Rops6g01229 6 27203847 27208069 ECH
Rops8g03097 8 68758442 68768046 Rops6g01229 6 27203847 27208069 PCT