Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03070 ATGGGAGAAATTCAGAAAGATTGTAATGACAGGCTCAGCTTTACACAGATCATCATAGTCTCATCTATTGGGTTGATATTTGCTTTAGCCCTGCATTATCGCCTGAGACTGATTAGAGATCGAAAGATCATCCCACGTTTCAGATATACACATGCAGGCCACATCCCAAAGCCTGAAAGATTCTCCCATTACGTGGCTAGGCAAATGGGGTTCAAAGATAGGAGAAATTGTCCTCATCTATGTAGATTGGCTTCTGAATACATAAGGAAATGTGAGGGATGTGAAGATGATATGTGTGCCTTCTTTGCAAACGAACCAGATGCGGATTCACTTTATGTGAAGCTGGTGGAGGAGTTTGAAAGATGCATTCTTAGTTACTTTGGATTCCATTGGAACTATGGTGATATAATGATAAGTCAGGTGTTGAGCTCGGACAGTGAGCCAAAAAAGAAGCTCAAGCACATGGTTATGGCAGCAACTAGGGAACAAAGGATAGAGAGAGTTGCCAAGAATCTGAAGGTGGCTAGTGTATTTAATACATTAGTAGAAGAGATGAAAGCAATGGGAGTTGCAACTGATGACTCTCAATGTACGGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGCCCAGTGCTCCTCCTCATGGGTGGAGGTATGGGAGCTGGCAAGAGCACTGTACTCAAGGAGATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAATGCCGTAGTCATTGAAGCAGATGCCTTCAAAGAATCGGATGTCATTTATAAGGCCCTTAGCTCAAGAGGTCATCATGACATGATTCGAACAGCTGAACTGGTGCACCAATCATCCACATATGCAGCCTCATCCCTCCTGGTGACAGCACTAAATGAGGGACGGGATGTAATTATGGACGGCACACTCTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGATACCGCATGGGAGTTGGCTACAGGGTGAATGAGGATGGAAAAGTAACTGAAAACTATTGGCAACGAATTGAAGATGAAGAACCTGAACAGGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTCTGTGATGCTTACCTTGCAGTCGTTAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAGTAAGGTCACAATTGACATCCCACAAGAGATTTGCTGATGCATTTATGACTTACTGTCAACTAGTAGACAATGCTCGGCTATACAGCACAAATGCATTGGAAGGCCCAGCCAAGTTGATAGGATGGAAAGATAGGGACAAGACACTGCTCGTTGATCCAGATGAAATCGACTGTTTGAAGAGGGTTGCAAAGTTGAATGAAGACGCCAACTCCATATATGAACTTTATAAGCACCCTAACCCAGCCTGTAAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTTTTCGATCCAAAGAATTGAGAACTTGAAATTGTTGAAATGA 1542 0.4403 MGEIQKDCNDRLSFTQIIIVSSIGLIFALALHYRLRLIRDRKIIPRFRYTHAGHIPKPERFSHYVARQMGFKDRRNCPHLCRLASEYIRKCEGCEDDMCAFFANEPDADSLYVKLVEEFERCILSYFGFHWNYGDIMISQVLSSDSEPKKKLKHMVMAATREQRIERVAKNLKVASVFNTLVEEMKAMGVATDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKEILKEPFWAGAAGNAVVIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTYAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNEDGKVTENYWQRIEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVRSQLTSHKRFADAFMTYCQLVDNARLYSTNALEGPAKLIGWKDRDKTLLVDPDEIDCLKRVAKLNEDANSIYELYKHPNPACKAGSVWKDIVLSPSRLNIQQELKFSIQRIENLKLLK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03070 513 Pfam Zeta toxin 205 318 IPR010488 GO:0005524|GO:0016301
Rops8g03070 513 Gene3D - 194 432 IPR027417 -
Rops8g03070 513 PANTHER UNCHARACTERIZED 8 511 IPR044802 -
Rops8g03070 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03070 Rops-Chr8 68098566 68103297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03070 - - gmx:121172610 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03070 8 68098566 68103297 Rops8g03070 8 68098566 68103297 ECH
Rops8g03070 8 68098566 68103297 Rops6g01280 6 27978776 27981882 PCT