Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01280 ATGCAGAGAGAGCATTATGGCAAACCAAGCTTCACACAGATCATGGTGGCATCTTCCGTTGGGTTGATATTTGCTGCAGCGATGCATTATCGTCTGAAAAAAATGAAAGATCGAAGGATCATTCCACGTCTGAGATTATCAAAAGCGGGCCAAGCCCCAAAACTTGAGAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAGGATAGGAGGAGTTGTCCACATCTATGTAAATTGGCTTCTGAATACATAAGGAAATCTGAGGGGTGTGAAGATGGTATCTACGCCTTCTTTGAGAGTGAACCAGATGCGGATTCACTTTTTGTGAAGCTTGTGGAGGAGTTTGAGAGGTGCATCCTTAGTTACTTTGCATTCCATTGGAGCTATGGTGATGTGTTGATAAGTCAGGTGTTGAGCGCTGACACTGAGCCAAGAAAGAAGCTCAAGCACCTATTTATGGCGGCAACTAGGGAACAAAGGGTTGAGAGGGTAACCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACATTAGTAGAAGAGATGAGAGCAATGGGACTTGTATCAAATGATGACTCTAGATGTACAGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGCCCAGTGCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGCAAGAGCACTGTGCTTAAGGATATTCTTAAAGAACCTTTCTGGGCAGGAGCATTAGGCAATGCTGTTATCATAGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGTTCAAGAGGGCATCATGACATGATTCGAACAGCTGAACTGGTACATCAATCATCCACAGATGCAGCCTCATCCCTCCTGGTAACAGCACTGAATGAGGGGAGGGATGTAATCATGGATGGCACATTCTCTTGGGTACCATTTGTTGTGCAGACAATAACAATGGCCAGAAATGTCCATCGCCGCCGTTACCGCATGGGAGCTGGCTACAAGGTGAAGGAGGATGGAACTGTAACTGAAAGCTATTGGGAAAGAATTGAAGGTGAAGAACCTGAAAAAGTTGGAGGCAAGAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTACCTTGCAGTCATCAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTGAGAGTGAAGTCACAATTGAAATCCCACAAGAGATTTGCTGATGCATTTCTGACTTATTGTCAGCTAGTAGACAATGCCCGGCTATACAGTACAAATTCTTTGGAAGCTCCACCCAAGTTAATAGGGTGGAAAGATAGAGACAAGACACTGCTGGTTGATCCAGATGAAATCGATTGTTTGAAGAGGGTTGCTAGTTTGAATGAAGATGCCGACTCTGTATATGAACTTTACAGGCACCCCAACCCAACTTGTGAAGCTGGATCCATATGGAAAGACATTGTATTGTCTCCTTCAAGGTTGAACATCCAACTGGAGCTGAAGTATTCAATCCAAAGGGTTGAGAGATATTTGATCCAAAAGGCTGACTTGATGAAGCGGTGA 1554 0.4434 MQREHYGKPSFTQIMVASSVGLIFAAAMHYRLKKMKDRRIIPRLRLSKAGQAPKLERFSHYVARQMGFKDRRSCPHLCKLASEYIRKSEGCEDGIYAFFESEPDADSLFVKLVEEFERCILSYFAFHWSYGDVLISQVLSADTEPRKKLKHLFMAATREQRVERVTKNLKVARVFNTLVEEMRAMGLVSNDDSRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGALGNAVIIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVKEDGTVTESYWERIEGEEPEKVGGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHKRFADAFLTYCQLVDNARLYSTNSLEAPPKLIGWKDRDKTLLVDPDEIDCLKRVASLNEDADSVYELYRHPNPTCEAGSIWKDIVLSPSRLNIQLELKYSIQRVERYLIQKADLMKR* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01280 517 Gene3D - 192 431 IPR027417 -
Rops6g01280 517 Pfam Zeta toxin 203 314 IPR010488 GO:0005524|GO:0016301
Rops6g01280 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 337 IPR027417 -
Rops6g01280 517 PANTHER UNCHARACTERIZED 3 512 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01280 Rops-Chr6 27978776 27981882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01280 - - pvu:PHAVU_007G178200g 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01280 6 27978776 27981882 Rops6g01280 6 27978776 27981882 ECH
Rops8g03070 8 68098566 68103297 Rops6g01280 6 27978776 27981882 PCT