Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03063 ATGAAGCAATCGCATCGGTGGCAGAGGACTCTGATCCTCTTTCTACTCTCTCTCTCCGTCGTTGCTCCTCTCGTTTTCTTCTCTCACAAGCTTCAAGTTCTCTCTCCCGATGGACGAAGAGAGTTTCTTGATGATTTATCGAGTTTTACATACAGGACAGATCCTTTAAGGTTAAATGCTATAGAACAGGAAGGTGCTGAAGAATTAGAAGAGCCAAAGCAAATTGTTTATAAAGAAAAAGATTTTGATTCAACATTTAGTGACAGTTCGGAAAAGGCTAATGATTCTGAGGAATCTAGAATTGAGGGGTTCAGAAATAAACTTTCGGAAAGAAATGAATTTGACCATGACAAAAGACAAAACCAGGACACTCAGCAGCAGAAAGGATTATCCTCCATGGATGGAGATAAGAAGAAATTTGATACAATATTTACGCACGATCAGAATATACAAACTCACTCTCAAAGAATGACAGATGAGAATATTGAAGTGACAGATAAGCAATCTGGTCTAACAGCAACCCAACATCATCAAATTTCACGCCCTCAATCTCGGAGAGTGGCAAATCAGAAGGTTGAGGAGATTAAGGATCAAATTATAAGAGCCAGAGCATACTTGGGCTTTGTTCCTCCAGGCAGCAACTCACACTTGGTGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCAGTTGGAGAAGCTACCAAGGATTCAGATCTGTCAAGGAGTGCTTTGCAGAAAAAGAGACACATGGAGGCTTCACTGTCTAAAGCCAGCCGTGCTTTCCCTGACTGCACTGCTATGGCTGCTAGGCTCCGTGCAATGAATCATATTGCTGAAGAGCAAGTTCGTTCTCAGCAACACCAAGCAACGTATCTTGTTCATCTTGCCGCAAGGACCACCCCGAAAGGTCTTCATTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGGAAAGGAAGCTGCCAAATGAAAATAAGATTCACGATCCAAAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTGGTTGTAAATTCCACCGTCTCTAATGCCAAGGAACAGGGGAAAATTGTTTTCCATGTAGTGACCGATTCACTCAACTTTCCTACAATCTCGATGTGGTTCTTATTAAATCCTCCTGGCAAAGCCACAGTTCACATACAGAACATAGACGACTTTGAATGGTTATCCAAGCACAATACATTCAATAAACTTAAGTCCAGTGATCCGAGATTTACTTCTGAATTGAATTTCCTGCGTTTCTACCTGCCAGAAATCTTCCCTGCTCTAAATAAGATTTTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTCGACTATGGAAGGCTAATATGCATGGAAAAGTAATTGCAGGAGTTGGGACTTGTCAGGAAGGTGAAACTTCATTTCGCAGGATGGATATGTTCATTAACTTCTCAGATCCATTCATTGGAAAGAGGTTTGATGCCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAACAGTGGAGGAGACATAAATTAACTGCAGTCTATCACAAATATTTGCAAATGGGTTCCAAGATGCCATTGTTAACTGCTGGAAGCTTGCCTTTAGGTTGGCTCACCTTCTATAACAAGACTATGGTTCTGGACAGACGGTGGCACATTCTTGGCCTTGGTTATGACTCAGATATTGATAGAAATGAGATAAAGCGAGCGGCGGTTATCCACTATGATGGAATTAGAAAGCCATGGTTGGATATTGCGATGGGGAGGTATAAGAGTTATTGGTCCAAATTTATGAAGTTTGACCACCCTATTTTGCAACGTTGCAATCTCCAGGCATAG 1881 0.4168 MKQSHRWQRTLILFLLSLSVVAPLVFFSHKLQVLSPDGRREFLDDLSSFTYRTDPLRLNAIEQEGAEELEEPKQIVYKEKDFDSTFSDSSEKANDSEESRIEGFRNKLSERNEFDHDKRQNQDTQQQKGLSSMDGDKKKFDTIFTHDQNIQTHSQRMTDENIEVTDKQSGLTATQHHQISRPQSRRVANQKVEEIKDQIIRARAYLGFVPPGSNSHLVKELKLRIKEMERAVGEATKDSDLSRSALQKKRHMEASLSKASRAFPDCTAMAARLRAMNHIAEEQVRSQQHQATYLVHLAARTTPKGLHCLSMQLTADYFALRPEERKLPNENKIHDPKLYHYAVFSDNVLACAVVVNSTVSNAKEQGKIVFHVVTDSLNFPTISMWFLLNPPGKATVHIQNIDDFEWLSKHNTFNKLKSSDPRFTSELNFLRFYLPEIFPALNKILLFDHDVVVQQDLSRLWKANMHGKVIAGVGTCQEGETSFRRMDMFINFSDPFIGKRFDANACTWAFGMNLFDLQQWRRHKLTAVYHKYLQMGSKMPLLTAGSLPLGWLTFYNKTMVLDRRWHILGLGYDSDIDRNEIKRAAVIHYDGIRKPWLDIAMGRYKSYWSKFMKFDHPILQRCNLQA* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03063 626 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 341 617 IPR029044 -
Rops8g03063 626 Pfam Glycosyl transferase family 8 308 600 IPR002495 GO:0016757
Rops8g03063 626 SUPERFAMILY Nucleotide-diphospho-sugar transferases 339 623 IPR029044 -
Rops8g03063 626 Coils Coil 218 238 - -
Rops8g03063 626 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 412 624 IPR029993 GO:0047262
Rops8g03063 626 MobiDBLite consensus disorder prediction 80 123 - -
Rops8g03063 626 MobiDBLite consensus disorder prediction 80 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03063 Rops-Chr8 67968823 67975386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03063 1 626 Glycosyltransferase AT1G06780 50.390 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03063 K13648 - gmx:100793193 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03063 8 67968823 67975386 Rops6g01286 6 28052200 28061676 PCT