Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03062 ATGGCAACCATCATCGCTAGTACCCCAACATCATCGATCACCCGCGCAGGTCTTGTGCTCAAGCGACCTCTTGGGGTCTCATCCTCTACCGTTCTTGGATTGCCAGCAATGGCTAAGGTTGGAAGAGTGAGGTGTTCCATGGAGGGAAAGCCTTCTGTGCAGGAAAGTAGCTCAAAGATAGGGATGGGGGCATCCTTGATCGCAGCTGCCTGCGCTGCAAGCATGTCAAGCCCAGCCATGGCTTTGGTGGATGAGAGAATGAGCACTGAAGGAACTGGGCTTCCCTTTGGGCTTAGCAACAACATTCTTGGTTGGATCCTGTTTGCTGTCTTTGGTCTTATATGGGCTCTCTATTTTCTCTATGTTTCCGGGCTTGACGAGGATGATGATTCTGGATTGTCCCTCTAA 408 0.5098 MATIIASTPTSSITRAGLVLKRPLGVSSSTVLGLPAMAKVGRVRCSMEGKPSVQESSSKIGMGASLIAAACAASMSSPAMALVDERMSTEGTGLPFGLSNNILGWILFAVFGLIWALYFLYVSGLDEDDDSGLSL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03062 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Rops8g03062 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03062 Rops-Chr8 67967637 67968378 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03062 K02721 - gmx:100306223 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03062 8 67967637 67968378 Rops6g01287 6 28062486 28063368 PCT