Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03061 ATGGCCACCTCTATCTCAAACATACTCATAGCCTTTCCCAAAACCCAGCAAGAATCATCTACCTTCGGATCCAACCACCTCAAATCACAAGCAGCACCATTAACCCTAACTCTAGCCACAAGAAAACCCACCATTAAATGCAACGCCTCCAAAACTAACTCCTCTTTGTCCTCCACCATCACACAACTCGAGACACAACAAGCACAAGACCCTTTGAAATCAAACGAAGGAAGCAACATAGGAGATGTGTGGCGGAAGATCCATGGTGAGGATAATTGGGCAGGGCTTCTCGACCCAATGGATCCTTTAATGAGATCTGAGCTGATCCGTTATGGTGAGATGGCCCAAGTTTGTTACGACGCCTTCGACTATGATCCATATTCCAAGTACTGTGGCAGCTGTAGATACCCTATTGATCAGTTTTTCAGTTCAATGGACATGCCAAATATAGGATACACCCTCACGCGCTACCTCTATGCCACCGCCAATGTCAACCTTCCGAACTTCTTCAAGAAGTCACGGTGGCCACACAAGTTGTGGAGCGAACATGCCAACTGGGCAGGCTTCGTGGCAGTCTCTGATGATGACACAACCAAGCGGCTAGGACGGAGGGACATCGTGGTGGCGTGGCGGGGAACGGTGACACACGTTGAATGGGTCGCCGATCTGTTGAATTTCCTCAGACCAGTGTCACCAGACATACCCTGCCCCGACAAAGAAGTTAAAGTTGAAGCTGGTTTCTTGGATTTTTACACTGATAAGGAAAAAGTATGCGGATATTGTAAATACTCTGCAAGGGAACAGGTTCTTGCGGAGGTGAAGAGGTTGTTGGAGAAGTACCCTAATGAGGAAGTGAGTGTGACAATAACGGGACATAGTTTGGGGAGTGCTATGGCTATTTTGAGTGCTTATGATATTGCGGAAACGGGGTTGAAAACGGATCGGGTTCATGTTACGGTGTTTTCGTTTTCGGGTCCAAGAGTGGGGAACGTGAGGTTTAAGGAGAGGTTGGAGGGGAAGTTGGGGGTGAAGGTGTTGAGGGTTCATAATGCTCATGATATGGTGGCTAAGTCGCCGGGGTTATTCTTCAACGAAACTTCGCCGCAGTGGGTGTTGAAGCTGGCGGAGAATTTGCCGTGGTGTTATGTGCATGTTGGGGTGGAGTTGGAGTTGGACCATAAGAAATCGCCTTATCTGAATCCAAACGGGGATGGTGCATGTGCCCATAACTTGGAAGCTCACCTGCATATGCTTGATGGATACCATGGTAGGAATCGTGAATTTAAGCCAATGATTGGGAGGGACATTGCTCTGGTGAACAAGGACTGTGACTTTTTGAAAGATGAACACTCAGTGCCACCAAAATGGAGGCAAGACCTGAACAAGAACATGATCAAAACCGAAGATGGACGTTGGGTGCAAGCTGAACGCCCTAAACTTGTTGATCACCCTGAAGATATTGATCACCATCTCACACAGCTAGGCCTGGCTTCATCTGATAGCTAG 1506 0.4788 MATSISNILIAFPKTQQESSTFGSNHLKSQAAPLTLTLATRKPTIKCNASKTNSSLSSTITQLETQQAQDPLKSNEGSNIGDVWRKIHGEDNWAGLLDPMDPLMRSELIRYGEMAQVCYDAFDYDPYSKYCGSCRYPIDQFFSSMDMPNIGYTLTRYLYATANVNLPNFFKKSRWPHKLWSEHANWAGFVAVSDDDTTKRLGRRDIVVAWRGTVTHVEWVADLLNFLRPVSPDIPCPDKEVKVEAGFLDFYTDKEKVCGYCKYSAREQVLAEVKRLLEKYPNEEVSVTITGHSLGSAMAILSAYDIAETGLKTDRVHVTVFSFSGPRVGNVRFKERLEGKLGVKVLRVHNAHDMVAKSPGLFFNETSPQWVLKLAENLPWCYVHVGVELELDHKKSPYLNPNGDGACAHNLEAHLHMLDGYHGRNREFKPMIGRDIALVNKDCDFLKDEHSVPPKWRQDLNKNMIKTEDGRWVQAERPKLVDHPEDIDHHLTQLGLASSDS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03061 501 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 27 478 - -
Rops8g03061 501 FunFam Phospholipase A1-II 3 83 484 - -
Rops8g03061 501 Pfam Lipase (class 3) 207 361 IPR002921 GO:0006629
Rops8g03061 501 CDD Lipase_3 139 393 - -
Rops8g03061 501 Gene3D alpha/beta hydrolase 83 487 IPR029058 -
Rops8g03061 501 SUPERFAMILY alpha/beta-Hydrolases 166 422 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03061 Rops-Chr8 67945866 67952803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03061 73 496 Acyl Lipid Metabolism Gene Families AT2G30550 60.369 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03061 - - gmx:100815007 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03061 8 67945866 67952803 Rops6g01289 6 28078014 28081344 PCT