Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03050 ATGCCTTTCACGATGAAGATTCAGCCGATCAATTCTCATGTGCCTGATGAGGGGACTAGGCTTGAGCCAGTCAAGCCTGTTGTCAAGTCGCGGCTAAAGCGGCTCTTCGAGCGCCAGTTCTCCAGCGTTCTAAGGAATTCAGGGTCGGAGAAAATCGCCGGCGAGGAGCCTCATCCAGGCAAGGACGGCGGCTCTGTTGATTTTGAACCGAGCTCGGCGTGTCTGGCCAAAATGGTGCAGAATTTTATGGAAGAGAATCACGATAAGCACTCCGTTTTCAACTGCTTCAATGGTAACTGTGATGATAACTCCGACGCCGAATCACACGCGCTTGGTGGTTTTGGCGAGTCCACTTATTCTTCTTCCAGTGAAGCTTACGAAATCCTTAAGGGTTTGGTGGCATATGCAAGTGTTAGTGAAAGGAATTTGCTAGCGGACGCAACTAAGATCATTGAGAAGAATAAGATGGTGTGCAAACGCAAAGACGATTTTTGCAGAAAGACTGTTACCGACGGGTTATTGGCTTTCGGATATGATACTTCCATCTGCAAATCTCGCTGGGAAAAATCCCCCTTTGGTCCCGCCGGGGAATATGAATACATTGATGTGATAATGGGAAATGAGAGGGTGATAGTTGACGTTGACTTCAGATCAGAATTCGAGATTGCTCGATCAACAAAGACATACAAGGCGATCCTCCAAACCCTTCCGTATGTATTCGTTGGGAAGTGTGATCGGTTGCAGAGGATCATAGACATCGTGTCAGAGGCTGCGAAACAGAGTCTGAAGAAGAAGGGCTTGCACGTTCCACCATGGAGAACAGTTGAATATGTCAGAGCCAAATGGCTCTCCCCTTACACGCGAACCACACCCCCAATGTTTTGTCATTGGCCGCACGGAATCAGAGAGGAAACTGAAGATAAACAGAAGCTTTTGATGGGAACTGGTGATGACAAGTCTGAACCGAGTTGTAACGAGTTGGGTGAGTCAGTGATGATAACCGAGAGTTCCCGTGAAGATGATGACAAGTCAAAGGTGACGGTCCCATGGAAGCCACCGGAGCTGAAACCCAAGAATTCTCTATCGGGGGTGAAGGTTGTGACTGGTTTGGCTGCTGTCTTCCATGAAAATCCATGA 1137 0.4811 MPFTMKIQPINSHVPDEGTRLEPVKPVVKSRLKRLFERQFSSVLRNSGSEKIAGEEPHPGKDGGSVDFEPSSACLAKMVQNFMEENHDKHSVFNCFNGNCDDNSDAESHALGGFGESTYSSSSEAYEILKGLVAYASVSERNLLADATKIIEKNKMVCKRKDDFCRKTVTDGLLAFGYDTSICKSRWEKSPFGPAGEYEYIDVIMGNERVIVDVDFRSEFEIARSTKTYKAILQTLPYVFVGKCDRLQRIIDIVSEAAKQSLKKKGLHVPPWRTVEYVRAKWLSPYTRTTPPMFCHWPHGIREETEDKQKLLMGTGDDKSEPSCNELGESVMITESSREDDDKSKVTVPWKPPELKPKNSLSGVKVVTGLAAVFHENP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03050 378 Pfam PDDEXK-like family of unknown function 77 288 IPR006502 -
Rops8g03050 378 PANTHER OS03G0796600 PROTEIN 27 292 IPR006502 -
Rops8g03050 378 MobiDBLite consensus disorder prediction 331 359 - -
Rops8g03050 378 MobiDBLite consensus disorder prediction 333 349 - -
Rops8g03050 378 MobiDBLite consensus disorder prediction 47 67 - -
Rops8g03050 378 NCBIfam uncharacterized plant-specific domain TIGR01615 166 289 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03050 Rops-Chr8 67759541 67761522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03050 - - gmx:100796711 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03050 8 67759541 67761522 Rops8g03050 8 67759541 67761522 ECH
Rops8g03050 8 67759541 67761522 Rops6g01302 6 28310309 28312318 PCT