Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01302 ATGCCTTTTCCGATGAAAATTCAGCCGATCGATTCTCAGATACATGAGGAGGGGACTCGGCTTGAGCTTGTCAAGCCGGTTGTCAAGTCACGATTCAAGCGGCTCTTCGAGCGTCAGTTCTCCGGCGTTCTGAGAAATTCTGCGGCGGAGAAGATCGGCGGTGGTGGCCAGGATCCGCATTTTTGCAAGGAAGGCGGCATCAATGGTGATTTCGAACCGAGCTCGGTATGTTTGGCGAGAATGGTGCAGAATTATATCGAAGAGAATCATCATGAGAAGCAACCCGCTCCCGTCAGGTGTGGACGCAACCGCTGTAACTGCTTTAATGGGATCTGTGATGATAGCTCTGGCGATGAATTAGACGCGCTTGGCGACTCTAACTATTCCCCTGGTGAAGCCTCTGAAATCCTCAAGGGTTTGGTGACTTGTGGGAGCGTTAGTGAGAGGAATTTACTAGCGGACACTGCAAAGATCGTTGATAAGAATAAGATCTGCAAACGCAAAGACAATTCCAGCCGAAAGATTGTAACAGAGGGGTTGTTGGCTCTTGGATACGATGCTTCCATTTGTAAATCTCGCTGGGAAAAAACCCCCTCTTATCCCGCCGGGGAATATGAATACATAGATGTGATTATAGGGGATGAGAGGGTGCTAATTGACATTGACTTCAGGTCAGAATTCGAGATCGCCAGATCAACCAAGACTTACAAGACGATTCTCCAGAACCTTCCATACATATTCGTTGGCAAGTGTGATCGGTTGCAGAGTATCATTACCATCGTTTCAGAGGCAGCGAAGCAGAGTCTGAAGAAGAAGGGGATGCACGTTCCACCATGGAGGAGAGCCGAATATGTAAAAGCAAAATGGCTCTCCCCTTGTGTACGAACCGCTAAGTCTACACTCCCAACGCAAGGGATCAAAGAGGAGAAAGATAAACAACAGTTTTTGAAAGTAGACTCTGTGGCTGAATCGATCTTTGCTTTATCTGAGAGTTCCGATGAAGAGGATAAGGCGGTGATGGAATGGAAGCCGCCGGAGCTGAAACCCAAGGGTTCACTTTCTGGGGTCAAGGTTGTGACTGGTTTGGCAGGGGTGTTCGATGATGATAACCCATAA 1116 0.4812 MPFPMKIQPIDSQIHEEGTRLELVKPVVKSRFKRLFERQFSGVLRNSAAEKIGGGGQDPHFCKEGGINGDFEPSSVCLARMVQNYIEENHHEKQPAPVRCGRNRCNCFNGICDDSSGDELDALGDSNYSPGEASEILKGLVTCGSVSERNLLADTAKIVDKNKICKRKDNSSRKIVTEGLLALGYDASICKSRWEKTPSYPAGEYEYIDVIIGDERVLIDIDFRSEFEIARSTKTYKTILQNLPYIFVGKCDRLQSIITIVSEAAKQSLKKKGMHVPPWRRAEYVKAKWLSPCVRTAKSTLPTQGIKEEKDKQQFLKVDSVAESIFALSESSDEEDKAVMEWKPPELKPKGSLSGVKVVTGLAGVFDDDNP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01302 371 PANTHER OS03G0796600 PROTEIN 27 304 IPR006502 -
Rops6g01302 371 Pfam PDDEXK-like family of unknown function 80 295 IPR006502 -
Rops6g01302 371 NCBIfam uncharacterized plant-specific domain TIGR01615 173 296 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01302 Rops-Chr6 28310309 28312318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01302 - - gmx:100782749 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03050 8 67759541 67761522 Rops6g01302 6 28310309 28312318 PCT