Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03035 ATGGAACCAAAGTGCACAATCAACTGTCGGCGGCCGGAGTTTCTTCCGACCGGCGGTGCACCTCTGCCGGAGAGTCCTAGAGTGCCAATGGAGTTTCTGTCAAGGTCATGGAGTGCCTCAGCTCTTGAGGTTTCCAAAGCTCTTGCACCTCATCATCAACCACCTCTTTCTTCTTCATGCATGCCTCCCAAGCCTGCAAATGGGTCCACTATTCCGGAAGAAACTAGTAGCCACTCTGTCTCTGAGGAGTTATCAACAACTGTGTCTAAGAACCAGTTCTCTTTTGCTTCCTCTGCTACATCACAACTTGTCCTTGAACGCATTATGTCACAGTCAGCAAGAGAGGAAGTGTCACCATTAACATCAGGTAGATTATCTCACAGCAGCGAGCCTTTGAATGGTGGTGGTTCATTAACTGGAACAGATAGCCCACCAATCTCTCCTTCAGATGAATTTGACGACGTTGTTAAGTTTTTCAGAGCAAACAATTCCATTCACCCGTTATTCAACGGTGGACGAGCCAGTGCTGCTATTGGCAATGGTGTAGCTTGCTCAGGACCTAAAACTGTTGGGAGATGGTTGAAAGACCGAAGAGAAAAGAAGAAAGAAGAAAACAGAACACATAATGCTCAGCTGCATGCTACTATTTCAGTGGCTGCAGTGGCTGCTGCTATAGCAGCCATTGCTGCGGCAACTGCAGCCTCATCTGCACCCAACAAGGATGAGAAGATGGCCAAGACAGACATGGCTGTAGCTTCTGCAGCCACATTAGTTGCAGCACAGTGCGTAGAGGCTGCTGAAGCAATGGGAGCTGAGCGTGATCACCTTGCTTCTGTGGTCAGCTCAGCTGTGAATGTCCGTTCTCATGATGATATCACTACTCTTACAGCTGCAGCTGCCACAGCTCTACGAGGAGCAGCAACCTTGAAAGCGAGAGCTTTGAAAGAGGTATGGAATGTTGCTGCAGTGACACCACTGGAGAAAGGTATTGGGGGGATTTCAATATGTGGTAAAGGTAATAATAACAGCAACACCAACAACACCAGCACCAGTGATAGTGGGGAAATTATCAATGGAGAAAATTTTCTAGGTGTCTGTAGCCAAGAGCTACTTGGTAGGGGCAGTGAATTACTCAAACGCACCCGTAAAGGTGATTTGCACTGGAAAATAGTTTCTGTTTATATACACCGAACAGGCCAGGTAATGCTCAATATGAAGAGCAAACATGTTGCAGGAACCATTACCAACAAGAACAAGTATGTTGTGATAGATGTGTGCACGGATTTACCAGCATGGCCAGGAAGACACGTGTTTGATGATGGAGAAAAGCGACGCTACTTTGGATTGAAGACAGACTCAAGGGGGATTGTGGAGTTTGAGTGTAGAAATCAAAGAGAATATGATATCTGGACTCAAGGGGTTTCGAGGCTTCTCTCCATTGTTGCACAAAGACAAAACAAATATGGGAATTGA 1473 0.4644 MEPKCTINCRRPEFLPTGGAPLPESPRVPMEFLSRSWSASALEVSKALAPHHQPPLSSSCMPPKPANGSTIPEETSSHSVSEELSTTVSKNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASAAIGNGVACSGPKTVGRWLKDRREKKKEENRTHNAQLHATISVAAVAAAIAAIAAATAASSAPNKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNVAAVTPLEKGIGGISICGKGNNNSNTNNTSTSDSGEIINGENFLGVCSQELLGRGSELLKRTRKGDLHWKIVSVYIHRTGQVMLNMKSKHVAGTITNKNKYVVIDVCTDLPAWPGRHVFDDGEKRRYFGLKTDSRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNKYGN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03035 490 Pfam Plant pleckstrin homology-like region 376 481 IPR013666 -
Rops8g03035 490 MobiDBLite consensus disorder prediction 62 84 - -
Rops8g03035 490 MobiDBLite consensus disorder prediction 115 149 - -
Rops8g03035 490 Pfam Auxin canalisation 23 329 IPR008546 -
Rops8g03035 490 MobiDBLite consensus disorder prediction 115 146 - -
Rops8g03035 490 MobiDBLite consensus disorder prediction 48 84 - -
Rops8g03035 490 PANTHER EXPRESSED PROTEIN 20 482 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03035 Rops-Chr8 67459415 67463445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03035 - - gmx:100805743 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03035 8 67459415 67463445 Rops8g03035 8 67459415 67463445 ECH
Rops8g03035 8 67459415 67463445 Rops6g01326 6 28668021 28671541 PCT