Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01326 ATGGACCCCAAGTTCACAATCAATTGTCGCCGAAATGAGTTGCTCCCAACCAGTAACACTCATTTGCCAGAGAGCCCGAGAATACCGATGGAGTTTCTGTCAAGGTCATGGAGTGCCTCTGCCCTTGAAGTCTCTAAAGCCTTGGCACCTCAACCACCTCCAACTCCTCCTTCTTGCATAGCTACCAAGCCTTCTAATGGTTTGACTAATTCTATTCCTGAAGAAACTACTGGTTTGTCTAAGGAATTCTCTAACATGTGTGGGAATCAATTCTCTTTTGCTCCCACTGCTACTTCCCAGCTTGTCCTTGAGCGCATTATGTCACAATCAGCAAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGACTTTCTCACAGTAGTGAACCTTTGAATGGTGGTGGTTCTTTAACTGGAACGGATAGTCCACCAATTTCTCCTTCTGAGGAGTTTGATGATGTTGTTAAGTTTTTTGGAGCAAATAATTCCATTCACCCCTTATTCAACGGTGGTAGAGCCATGAGTTCAGCTATTGGAAGTGCCACTCCTTGCTCAGGACCTAAAACAGTTGGAAGATGGTTGAAAGAGAGAAGAGAGAAAAAGAAAGAAGAAAACAGAAGTCACAATGCTCAACTACATGCTGCTATTTCTGTAGCTGCGGTGGCTGCTGCTGTTGCAGCCATCACTGCTGGAACAGCAGCCTCATCAGCACCCAGCAAGGATGAGAGGATGGCCAAAACAGACATGGCTGTGGCTTCTGCAGCCACATTAGTTGCTGCTCAGTGCGTAGAAGCTGCTGAAGCAATGGGAGCTGAGCGTGACCACCTTGCTTCTGTGATTAGCTCTGCTGTGAATGTTCGCTCTCATGATGATATTACAACACTAACCGCTGCAGCTGCCACAGCTCTAAGAGGGGCAGCAACCTTGAAAGCAAGAGCATCGAAGGATATTTGGAATATTACTGCAGTGACACCACTAGAGAGAAGCAAAGGTATTGGAATATGTGGTAAAGGGAACAACAGTAATTCTAGCACCAGTGACAGTGGAGAGATTATCAATGGAGAAAATTTTCTGGGTGCCTGCAGCCAAGAGCTCCTTGCTAGGGGCACTGACTTACTCAAAAGGACCCGTAAAGGTGATCTTCATTGGAAGATAGTTTCTGTTTATATACATCGAACAGGCCAGGTGATGCTGAAAATGAAAAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTATGCCCGAATTTACCAGCATGGCCAGGAAGGCATCTATTTGATGATGGTGAAAAAAGAAGGTATTTTGGATTGAAGACAGAATCAAGGGGGATTGTGGAGTTTGAATGTAGAAATCAAAGAGAATATGACATCTGGACTCAAGGAGTTTCCAGACTTCTTTCCATTGTTGCACAGAGGCAAAACAGAAATGGGATTTGA 1455 0.446 MDPKFTINCRRNELLPTSNTHLPESPRIPMEFLSRSWSASALEVSKALAPQPPPTPPSCIATKPSNGLTNSIPEETTGLSKEFSNMCGNQFSFAPTATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSEEFDDVVKFFGANNSIHPLFNGGRAMSSAIGSATPCSGPKTVGRWLKERREKKKEENRSHNAQLHAAISVAAVAAAVAAITAGTAASSAPSKDERMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVISSAVNVRSHDDITTLTAAAATALRGAATLKARASKDIWNITAVTPLERSKGIGICGKGNNSNSSTSDSGEIINGENFLGACSQELLARGTDLLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCPNLPAWPGRHLFDDGEKRRYFGLKTESRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRNGI* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01326 484 MobiDBLite consensus disorder prediction 113 149 - -
Rops6g01326 484 MobiDBLite consensus disorder prediction 113 144 - -
Rops6g01326 484 PANTHER EXPRESSED PROTEIN 18 476 IPR040269 -
Rops6g01326 484 MobiDBLite consensus disorder prediction 47 67 - -
Rops6g01326 484 Pfam Auxin canalisation 23 327 IPR008546 -
Rops6g01326 484 Pfam Plant pleckstrin homology-like region 370 475 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01326 Rops-Chr6 28668021 28671541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01326 - - gmx:100782024 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01326 6 28668021 28671541 Rops6g01326 6 28668021 28671541 ECH
Rops8g03035 8 67459415 67463445 Rops6g01326 6 28668021 28671541 PCT